PFIM-package	PFIM-package
addModel	addModel
addModel,LibraryOfModels-method	addModel
addModels	addModels
addModels,LibraryOfModels-method	addModels
Administration	Administration-class
Administration-class	Administration-class
AdministrationConstraints	AdministrationConstraints-class
AdministrationConstraints-class	AdministrationConstraints-class
Arm	Arm-class
Arm-class	Arm-class
BayesianFim	BayesianFim-class
BayesianFim-class	BayesianFim-class
checkSamplingTimeConstraintsForContinuousOptimization	checkSamplingTimeConstraintsForContinuousOptimization
checkSamplingTimeConstraintsForContinuousOptimization,SamplingTimeConstraints-method	checkSamplingTimeConstraintsForContinuousOptimization
checkValiditySamplingConstraint	checkValiditySamplingConstraint
checkValiditySamplingConstraint,Design-method	checkValiditySamplingConstraint
Combined1	Combined1-class
Combined1-class	Combined1-class
computeVMat	computeVMat
Constant	Constant-class
Constant-class	Constant-class
convertPKModelAnalyticToPKModelODE	convertPKModelAnalyticToPKModelODE
convertPKModelAnalyticToPKModelODE,ModelAnalytic-method	convertPKModelAnalyticToPKModelODE
convertPKModelAnalyticToPKModelODE,ModelAnalyticInfusion-method	convertPKModelAnalyticToPKModelODE
convertPKModelAnalyticToPKModelODE,ModelAnalyticSteadyState-method	convertPKModelAnalyticToPKModelODE
dataForArmEvaluation	dataForArmEvaluation
dataForArmEvaluation,Design-method	dataForArmEvaluation
defineModel	defineModel
defineModel,Model-method	defineModel
defineModelEquationsFromStringToFunction	defineModelEquationsFromStringToFunction
defineModelEquationsFromStringToFunction,ModelAnalytic-method	defineModelEquationsFromStringToFunction
defineModelEquationsFromStringToFunction,ModelAnalyticInfusion-method	defineModelEquationsFromStringToFunction
defineModelEquationsFromStringToFunction,ModelAnalyticInfusionSteadyState-method	defineModelEquationsFromStringToFunction
defineModelEquationsFromStringToFunction,ModelAnalyticSteadyState-method	defineModelEquationsFromStringToFunction
defineModelEquationsFromStringToFunction,ModelODEBolus-method	defineModelEquationsFromStringToFunction
defineModelEquationsFromStringToFunction,ModelODEDoseInEquations-method	defineModelEquationsFromStringToFunction
defineModelEquationsFromStringToFunction,ModelODEDoseNotInEquations-method	defineModelEquationsFromStringToFunction
defineModelEquationsFromStringToFunction,ModelODEInfusionDoseInEquations-method	defineModelEquationsFromStringToFunction
defineModelFromLibraryOfModels	defineModelFromLibraryOfModels
defineModelFromLibraryOfModels,Model-method	defineModelFromLibraryOfModels
defineModelType	defineModelType
defineModelType,Model-method	defineModelType
defineModelUserDefined	defineModelUserDefined
defineModelUserDefined,Model-method	defineModelUserDefined
definePKModel	definePKModel
definePKModel,ModelAnalytic-method	definePKModel
definePKModel,ModelAnalyticInfusion-method	definePKModel
definePKModel,ModelAnalyticSteadyState-method	definePKModel
definePKModel,ModelODE-method	definePKModel
definePKModel,ModelODEDoseInEquations-method	definePKModel
definePKModel,ModelODEInfusionDoseInEquations-method	definePKModel
definePKPDModel	definePKPDModel
definePKPDModel,ModelAnalytic,ModelAnalytic-method	definePKPDModel
definePKPDModel,ModelAnalytic,ModelODE-method	definePKPDModel
definePKPDModel,ModelAnalyticInfusion,ModelAnalytic-method	definePKPDModel
definePKPDModel,ModelAnalyticInfusion,ModelODE-method	definePKPDModel
definePKPDModel,ModelAnalyticSteadyState,ModelAnalyticSteadyState-method	definePKPDModel
definePKPDModel,ModelAnalyticSteadyState,ModelODE-method	definePKPDModel
definePKPDModel,ModelODEBolus,ModelODE-method	definePKPDModel
definePKPDModel,ModelODEDoseInEquations,ModelODE-method	definePKPDModel
definePKPDModel,ModelODEDoseNotInEquations,ModelODE-method	definePKPDModel
definePKPDModel,ModelODEInfusion,ModelODE-method	definePKPDModel
definePKPDModel,ModelODEInfusionDoseInEquations,ModelODE-method	definePKPDModel
Design	Design-class
Design-class	Design-class
Distribution	Distribution-class
Distribution-class	Distribution-class
EvaluateArm	EvaluateArm
EvaluateArm,Arm-method	EvaluateArm
EvaluateDesign	EvaluateDesign
EvaluateDesign,Design-method	EvaluateDesign
EvaluateErrorModelDerivatives	EvaluateErrorModelDerivatives
EvaluateErrorModelDerivatives,ModelError-method	EvaluateErrorModelDerivatives
EvaluateFisherMatrix	EvaluateFisherMatrix
EvaluateFisherMatrix,BayesianFim-method	EvaluateFisherMatrix
EvaluateFisherMatrix,IndividualFim-method	EvaluateFisherMatrix
EvaluateFisherMatrix,PopulationFim-method	EvaluateFisherMatrix
EvaluateModel	EvaluateModel
EvaluateModel,ModelAnalytic-method	EvaluateModel
EvaluateModel,ModelAnalyticInfusion-method	EvaluateModel
EvaluateModel,ModelAnalyticInfusionSteadyState-method	EvaluateModel
EvaluateModel,ModelAnalyticSteadyState-method	EvaluateModel
EvaluateModel,ModelODEBolus-method	EvaluateModel
EvaluateModel,ModelODEDoseInEquations-method	EvaluateModel
EvaluateModel,ModelODEDoseNotInEquations-method	EvaluateModel
EvaluateModel,ModelODEInfusionDoseInEquations-method	EvaluateModel
EvaluateModelGradient	EvaluateModelGradient
EvaluateModelGradient,ModelAnalytic-method	EvaluateModelGradient
EvaluateModelGradient,ModelAnalyticInfusion-method	EvaluateModelGradient
EvaluateModelGradient,ModelAnalyticInfusionSteadyState-method	EvaluateModelGradient
EvaluateModelGradient,ModelAnalyticSteadyState-method	EvaluateModelGradient
EvaluateModelGradient,ModelODEBolus-method	EvaluateModelGradient
EvaluateModelGradient,ModelODEDoseInEquations-method	EvaluateModelGradient
EvaluateModelGradient,ModelODEDoseNotInEquations-method	EvaluateModelGradient
EvaluateModelGradient,ModelODEInfusionDoseInEquations-method	EvaluateModelGradient
EvaluateVarianceFIM	EvaluateVarianceFIM
EvaluateVarianceFIM,IndividualFim-method	EvaluateVarianceFIM
EvaluateVarianceFIM,PopulationFim-method	EvaluateVarianceFIM
EvaluateVarianceModel	EvaluateVarianceModel
EvaluateVarianceModel,Model-method	EvaluateVarianceModel
Evaluation	Evaluation-class
Evaluation-class	Evaluation-class
FedorovWynnAlgorithm	FedorovWynnAlgorithm-class
FedorovWynnAlgorithm-class	FedorovWynnAlgorithm-class
FedorovWynnAlgorithm_Rcpp	FedorovWynnAlgorithm_Rcpp
Fim	Fim-class
Fim-class	Fim-class
fisher.simplex	fisher.simplex
fun.amoeba	fun.amoeba
generateFimsFromConstraints	generateFimsFromConstraints
generateFimsFromConstraints,Optimization-method	generateFimsFromConstraints
generateReportEvaluation	generateReportEvaluation
generateReportEvaluation,BayesianFim-method	generateReportEvaluation
generateReportEvaluation,IndividualFim-method	generateReportEvaluation
generateReportEvaluation,PopulationFim-method	generateReportEvaluation
generateReportOptimization	generateReportOptimization
generateReportOptimization,FedorovWynnAlgorithm-method	generateReportOptimization
generateReportOptimization,MultiplicativeAlgorithm-method	generateReportOptimization
generateReportOptimization,PGBOAlgorithm-method	generateReportOptimization
generateReportOptimization,PSOAlgorithm-method	generateReportOptimization
generateReportOptimization,SimplexAlgorithm-method	generateReportOptimization
generateSamplingsFromSamplingConstraints	generateSamplingsFromSamplingConstraints
generateSamplingsFromSamplingConstraints,SamplingTimeConstraints-method	generateSamplingsFromSamplingConstraints
generateTables	generateTables
generateTables,Evaluation-method	generateTables
generateTables,Optimization-method	generateTables
getAdjustedGradient	getAdjustedGradient
getAdjustedGradient,LogNormal-method	getAdjustedGradient
getAdjustedGradient,Normal-method	getAdjustedGradient
getAdministration	getAdministration
getAdministration,Arm-method	getAdministration
getAdministrationConstraint	getAdministrationConstraint
getAdministrationConstraint,Arm-method	getAdministrationConstraint
getAdministrations	getAdministrations
getAdministrations,Arm-method	getAdministrations
getAdministrationsConstraints	getAdministrationsConstraints
getAdministrationsConstraints,Arm-method	getAdministrationsConstraints
getArms	getArms
getArms,Design-method	getArms
getArms,OptimizationAlgorithm-method	getArms
getcError	getcError
getcError,ModelError-method	getcError
getColumnAndParametersNamesFIM	getColumnAndParametersNamesFIM
getColumnAndParametersNamesFIM,BayesianFim-method	getColumnAndParametersNamesFIM
getColumnAndParametersNamesFIM,IndividualFim-method	getColumnAndParametersNamesFIM
getColumnAndParametersNamesFIM,PopulationFim-method	getColumnAndParametersNamesFIM
getColumnAndParametersNamesFIMInLatex	getColumnAndParametersNamesFIMInLatex
getColumnAndParametersNamesFIMInLatex,BayesianFim-method	getColumnAndParametersNamesFIMInLatex
getColumnAndParametersNamesFIMInLatex,IndividualFim-method	getColumnAndParametersNamesFIMInLatex
getColumnAndParametersNamesFIMInLatex,PopulationFim-method	getColumnAndParametersNamesFIMInLatex
getConditionNumberFixedEffects	getConditionNumberFixedEffects
getConditionNumberFixedEffects,Fim-method	getConditionNumberFixedEffects
getConditionNumberVarianceEffects	getConditionNumberVarianceEffects
getConditionNumberVarianceEffects,BayesianFim-method	getConditionNumberVarianceEffects
getConditionNumberVarianceEffects,Fim-method	getConditionNumberVarianceEffects
getContent	getContent
getContent,LibraryOfModels-method	getContent
getCorrelationMatrix	getCorrelationMatrix
getCorrelationMatrix,Evaluation-method	getCorrelationMatrix
getCorrelationMatrix,Fim-method	getCorrelationMatrix
getCorrelationMatrix,Optimization-method	getCorrelationMatrix
getDataForArmEvaluation	getDataForArmEvaluation
getDataForArmEvaluation,Arm-method	getDataForArmEvaluation
getDataFrameResults	getDataFrameResults
getDataFrameResults,FedorovWynnAlgorithm-method	getDataFrameResults
getDataFrameResults,MultiplicativeAlgorithm-method	getDataFrameResults
getDataFrameResults,Optimization-method	getDataFrameResults
getDcriterion	getDcriterion
getDcriterion,Evaluation-method	getDcriterion
getDcriterion,Fim-method	getDcriterion
getDcriterion,Optimization-method	getDcriterion
getDelta	getDelta
getDelta,MultiplicativeAlgorithm-method	getDelta
getDerivatives	getDerivatives
getDerivatives,ModelError-method	getDerivatives
getDescription	getDescription
getDescription,Model-method	getDescription
getDesigns	getDesigns
getDesigns,PFIMProject-method	getDesigns
getDeterminant	getDeterminant
getDeterminant,Evaluation-method	getDeterminant
getDeterminant,Fim-method	getDeterminant
getDeterminant,Optimization-method	getDeterminant
getDistribution	getDistribution
getDistribution,ModelParameter-method	getDistribution
getDose	getDose
getDose,Administration-method	getDose
getDose,AdministrationConstraints-method	getDose
getEigenValues	getEigenValues
getEigenValues,Fim-method	getEigenValues
getElementaryProtocols	getElementaryProtocols
getElementaryProtocols,Optimization-method	getElementaryProtocols
getEquation	getEquation
getEquation,ModelError-method	getEquation
getEquations	getEquations
getEquations,Model-method	getEquations
getEquationsAfterInfusion	getEquationsAfterInfusion
getEquationsAfterInfusion,Model-method	getEquationsAfterInfusion
getEquationsDuringInfusion	getEquationsDuringInfusion
getEquationsDuringInfusion,Model-method	getEquationsDuringInfusion
getEvaluationFIMResults	getEvaluationFIMResults
getEvaluationFIMResults,Optimization-method	getEvaluationFIMResults
getEvaluationInitialDesignResults	getEvaluationInitialDesignResults
getEvaluationInitialDesignResults,Optimization-method	getEvaluationInitialDesignResults
getFim	getFim
getFim,Design-method	getFim
getFim,OptimizationAlgorithm-method	getFim
getFim,PFIMProject-method	getFim
getFisherMatrix	getFisherMatrix
getFisherMatrix,Evaluation-method	getFisherMatrix
getFisherMatrix,Fim-method	getFisherMatrix
getFisherMatrix,Optimization-method	getFisherMatrix
getFixedEffects	getFixedEffects
getFixedEffects,Fim-method	getFixedEffects
getFixedMu	getFixedMu
getFixedMu,ModelParameter-method	getFixedMu
getFixedOmega	getFixedOmega
getFixedOmega,ModelParameter-method	getFixedOmega
getFixedParameters	getFixedParameters
getFixedParameters,Model-method	getFixedParameters
getFixedTimes	getFixedTimes
getFixedTimes,SamplingTimeConstraints-method	getFixedTimes
getInitialConditions	getInitialConditions
getInitialConditions,Arm-method	getInitialConditions
getInitialConditions,Model-method	getInitialConditions
getIterationAndCriteria	getIterationAndCriteria
getIterationAndCriteria,OptimizationAlgorithm-method	getIterationAndCriteria
getLambda	getLambda
getLambda,MultiplicativeAlgorithm-method	getLambda
getLibraryPDModels	getLibraryPDModels
getLibraryPDModels,LibraryOfModels-method	getLibraryPDModels
getLibraryPKModels	getLibraryPKModels
getLibraryPKModels,LibraryOfModels-method	getLibraryPKModels
getMinSampling	getMinSampling
getMinSampling,SamplingTimeConstraints-method	getMinSampling
getModel	getModel
getModel,PFIMProject-method	getModel
getModelEquations	getModelEquations
getModelEquations,PFIMProject-method	getModelEquations
getModelError	getModelError
getModelError,Model-method	getModelError
getModelError,PFIMProject-method	getModelError
getModelErrorParametersValues	getModelErrorParametersValues
getModelErrorParametersValues,Model-method	getModelErrorParametersValues
getModelFromLibrary	getModelFromLibrary
getModelFromLibrary,Model-method	getModelFromLibrary
getModelParameters	getModelParameters
getModelParameters,PFIMProject-method	getModelParameters
getModelParametersValues	getModelParametersValues
getModelParametersValues,Model-method	getModelParametersValues
getMu	getMu
getMu,Distribution-method	getMu
getMu,ModelParameter-method	getMu
getName	getName
getName,Arm-method	getName
getName,Design-method	getName
getName,LibraryOfModels-method	getName
getName,Model-method	getName
getName,ModelParameter-method	getName
getName,PFIMProject-method	getName
getNames	getNames
getNames,list-method	getNames
getNumberOfArms	getNumberOfArms
getNumberOfArms,Design-method	getNumberOfArms
getNumberOfIterations	getNumberOfIterations
getNumberOfIterations,MultiplicativeAlgorithm-method	getNumberOfIterations
getNumberOfParameters	getNumberOfParameters
getNumberOfParameters,Model-method	getNumberOfParameters
getNumberOfsamplingsOptimisable	getNumberOfsamplingsOptimisable
getNumberOfsamplingsOptimisable,SamplingTimeConstraints-method	getNumberOfsamplingsOptimisable
getNumberOfTimesByWindows	getNumberOfTimesByWindows
getNumberOfTimesByWindows,SamplingTimeConstraints-method	getNumberOfTimesByWindows
getOdeSolverParameters	getOdeSolverParameters
getOdeSolverParameters,Model-method	getOdeSolverParameters
getOdeSolverParameters,PFIMProject-method	getOdeSolverParameters
getOmega	getOmega
getOmega,Distribution-method	getOmega
getOmega,ModelParameter-method	getOmega
getOptimalDesign	getOptimalDesign
getOptimalDesign,OptimizationAlgorithm-method	getOptimalDesign
getOptimalFrequencies	getOptimalFrequencies
getOptimalFrequencies,FedorovWynnAlgorithm-method	getOptimalFrequencies
getOptimalWeights	getOptimalWeights
getOptimalWeights,MultiplicativeAlgorithm-method	getOptimalWeights
getOptimizationResults	getOptimizationResults
getOptimizationResults,Optimization-method	getOptimizationResults
getOptimizer	getOptimizer
getOptimizer,PFIMProject-method	getOptimizer
getOptimizerParameters	getOptimizerParameters
getOptimizerParameters,PFIMProject-method	getOptimizerParameters
getOutcome	getOutcome
getOutcome,Administration-method	getOutcome
getOutcome,AdministrationConstraints-method	getOutcome
getOutcome,ModelError-method	getOutcome
getOutcome,SamplingTimeConstraints-method	getOutcome
getOutcome,SamplingTimes-method	getOutcome
getOutcomes	getOutcomes
getOutcomes,Model-method	getOutcomes
getOutcomes,PFIMProject-method	getOutcomes
getOutcomesEvaluation	getOutcomesEvaluation
getOutcomesEvaluation,Design-method	getOutcomesEvaluation
getOutcomesForEvaluation	getOutcomesForEvaluation
getOutcomesForEvaluation,Model-method	getOutcomesForEvaluation
getOutcomesGradient	getOutcomesGradient
getOutcomesGradient,Design-method	getOutcomesGradient
getParameters	getParameters
getParameters,Distribution-method	getParameters
getParameters,Model-method	getParameters
getParameters,ModelError-method	getParameters
getPDModel	getPDModel
getPDModel,LibraryOfPKPDModels-method	getPDModel
getPKModel	getPKModel
getPKModel,LibraryOfPKPDModels-method	getPKModel
getPKPDModel	getPKPDModel
getPKPDModel,LibraryOfPKPDModels-method	getPKPDModel
getPlotOptions	getPlotOptions
getProportionsOfSubjects	getProportionsOfSubjects
getProportionsOfSubjects,Optimization-method	getProportionsOfSubjects
getRSE	getRSE
getRSE,BayesianFim-method	getRSE
getRSE,Evaluation-method	getRSE
getRSE,IndividualFim-method	getRSE
getRSE,Optimization-method	getRSE
getRSE,PopulationFim-method	getRSE
getSamplings	getSamplings
getSamplings,SamplingTimeConstraints-method	getSamplings
getSamplings,SamplingTimes-method	getSamplings
getSamplingsWindows	getSamplingsWindows
getSamplingsWindows,SamplingTimeConstraints-method	getSamplingsWindows
getSamplingTime	getSamplingTime
getSamplingTime,Arm-method	getSamplingTime
getSamplingTimeConstraint	getSamplingTimeConstraint
getSamplingTimeConstraint,Arm-method	getSamplingTimeConstraint
getSamplingTimes	getSamplingTimes
getSamplingTimes,Arm-method	getSamplingTimes
getSamplingTimesConstraints	getSamplingTimesConstraints
getSamplingTimesConstraints,Arm-method	getSamplingTimesConstraints
getSE	getSE
getSE,Evaluation-method	getSE
getSE,Fim-method	getSE
getSE,Optimization-method	getSE
getShrinkage	getShrinkage
getShrinkage,BayesianFim-method	getShrinkage
getShrinkage,Evaluation-method	getShrinkage
getShrinkage,IndividualFim-method	getShrinkage
getShrinkage,Optimization-method	getShrinkage
getShrinkage,PopulationFim-method	getShrinkage
getSigmaInter	getSigmaInter
getSigmaInter,ModelError-method	getSigmaInter
getSigmaSlope	getSigmaSlope
getSigmaSlope,ModelError-method	getSigmaSlope
getSize	getSize
getSize,Arm-method	getSize
getSize,Design-method	getSize
getTau	getTau
getTau,Administration-method	getTau
getTimeDose	getTimeDose
getTimeDose,Administration-method	getTimeDose
getTinf	getTinf
getTinf,Administration-method	getTinf
getVariables	getVariables
getVariables,ModelInfusion-method	getVariables
getVariables,ModelODE-method	getVariables
getVariables,ModelODEBolus-method	getVariables
getVarianceEffects	getVarianceEffects
getVarianceEffects,Fim-method	getVarianceEffects
getWeightThreshold	getWeightThreshold
getWeightThreshold,MultiplicativeAlgorithm-method	getWeightThreshold
IndividualFim	IndividualFim-class
IndividualFim-class	IndividualFim-class
initialize,Administration-method	initialize-Administration-method
initialize,AdministrationConstraints-method	initialize-AdministrationConstraints-method
initialize,Arm-method	initialize-Arm-method
initialize,Combined1-method	initialize-Combined1-method
initialize,Constant-method	initialize-Constant-method
initialize,Design-method	initialize-Design-method
initialize,Distribution-method	initialize-Distribution-method
initialize,Evaluation-method	initialize-Evaluation-method
initialize,FedorovWynnAlgorithm-method	initialize-FedorovWynnAlgorithm-method
initialize,Fim-method	initialize-Fim-method
initialize,LibraryOfModels-method	initialize-LibraryOfModels-method
initialize,LibraryOfPKPDModels-method	initialize-LibraryOfPKPDModels-method
initialize,LogNormal-method	initialize-LogNormal-method
initialize,Model-method	initialize-Model-method
initialize,ModelAnalytic-method	initialize-ModelAnalytic-method
initialize,ModelAnalyticBolus-method	initialize-ModelAnalyticBolus-method
initialize,ModelAnalyticBolusSteadyState-method	initialize-ModelAnalyticBolusSteadyState-method
initialize,ModelAnalyticInfusion-method	initialize-ModelAnalyticInfusion-method
initialize,ModelAnalyticInfusionSteadyState-method	initialize-ModelAnalyticInfusionSteadyState-method
initialize,ModelAnalyticSteadyState-method	initialize-ModelAnalyticSteadyState-method
initialize,ModelBolus-method	initialize-ModelBolus-method
initialize,ModelError-method	initialize-ModelError-method
initialize,ModelInfusion-method	initialize-ModelInfusion-method
initialize,ModelParameter-method	initialize-ModelParameter-method
initialize,MultiplicativeAlgorithm-method	initialize-MultiplicativeAlgorithm-method
initialize,Normal-method	initialize-Normal-method
initialize,Optimization-method	initialize-Optimization-method
initialize,OptimizationAlgorithm-method	initialize-OptimizationAlgorithm-method
initialize,PFIMProject-method	initialize-PFIMProject-method
initialize,PGBOAlgorithm-method	initialize-PGBOAlgorithm-method
initialize,Proportional-method	initialize-Proportional-method
initialize,PSOAlgorithm-method	initialize-PSOAlgorithm-method
initialize,SamplingTimeConstraints-method	initialize-SamplingTimeConstraints-method
initialize,SamplingTimes-method	initialize-SamplingTimes-method
initialize,SimplexAlgorithm-method	initialize-SimplexAlgorithm-method
isDoseInEquations	isDoseInEquations
isDoseInEquations,Model-method	isDoseInEquations
isModelAnalytic	isModelAnalytic
isModelAnalytic,Model-method	isModelAnalytic
isModelBolus	isModelBolus
isModelBolus,Model-method	isModelBolus
isModelInfusion	isModelInfusion
isModelInfusion,Model-method	isModelInfusion
isModelODE	isModelODE
isModelODE,Model-method	isModelODE
isModelSteadyState	isModelSteadyState
isModelSteadyState,Model-method	isModelSteadyState
LibraryOfModels	LibraryOfModels-class
LibraryOfModels-class	LibraryOfModels-class
LibraryOfPDModels	LibraryOfPDModels
LibraryOfPKModels	LibraryOfPKModels
LibraryOfPKPDModels	LibraryOfPKPDModels-class
LibraryOfPKPDModels-class	LibraryOfPKPDModels-class
LogNormal	LogNormal-class
LogNormal-class	LogNormal-class
Model	Model-class
Model-class	Model-class
ModelAnalytic	ModelAnalytic-class
ModelAnalytic-class	ModelAnalytic-class
ModelAnalyticBolus	ModelAnalyticBolus-class
ModelAnalyticBolus-class	ModelAnalyticBolus-class
ModelAnalyticBolusSteadyState	ModelAnalyticBolusSteadyState-class
ModelAnalyticBolusSteadyState-class	ModelAnalyticBolusSteadyState-class
ModelAnalyticInfusion	ModelAnalyticInfusion-class
ModelAnalyticInfusion-class	ModelAnalyticInfusion-class
ModelAnalyticInfusionSteadyState	ModelAnalyticInfusionSteadyState-class
ModelAnalyticInfusionSteadyState-class	ModelAnalyticInfusionSteadyState-class
ModelAnalyticSteadyState	ModelAnalyticSteadyState-class
ModelAnalyticSteadyState-class	ModelAnalyticSteadyState-class
ModelBolus	ModelBolus-class
ModelBolus-class	ModelBolus-class
ModelError	ModelError-class
ModelError-class	ModelError-class
ModelInfusion	ModelInfusion-class
ModelInfusion-class	ModelInfusion-class
ModelODE	ModelODE-class
ModelODE-class	ModelODE-class
ModelODEBolus	getVariables
ModelODEBolus-class	getVariables
ModelODEDoseInEquations	ModelODEDoseInEquations-class
ModelODEDoseInEquations-class	ModelODEDoseInEquations-class
ModelODEDoseNotInEquations	ModelODEDoseNotInEquations-class
ModelODEDoseNotInEquations-class	ModelODEDoseNotInEquations-class
ModelODEInfusion	ModelODEInfusion-class
ModelODEInfusion-class	ModelODEInfusion-class
ModelODEInfusionDoseInEquations	ModelODEInfusionDoseInEquations-class
ModelODEInfusionDoseInEquations-class	ModelODEInfusionDoseInEquations-class
ModelParameter	ModelParameter-class
ModelParameter-class	ModelParameter-class
MultiplicativeAlgorithm	MultiplicativeAlgorithm-class
MultiplicativeAlgorithm-class	MultiplicativeAlgorithm-class
MultiplicativeAlgorithm_Rcpp	MultiplicativeAlgorithm_Rcpp
Normal	Normal-class
Normal-class	Normal-class
Optimization	Optimization-class
Optimization-class	Optimization-class
OptimizationAlgorithm	OptimizationAlgorithm-class
OptimizationAlgorithm-class	OptimizationAlgorithm-class
optimize	optimize
optimize,FedorovWynnAlgorithm-method	optimize
optimize,MultiplicativeAlgorithm-method	optimize
optimize,PGBOAlgorithm-method	optimize
optimize,PSOAlgorithm-method	optimize
optimize,SimplexAlgorithm-method	optimize
package-PFIM	PFIM-package
parametersForComputingGradient	parametersForComputingGradient
parametersForComputingGradient,Model-method	parametersForComputingGradient
PFIM	PFIM-package
PFIM,	PFIM-package
PFIMProject	PFIMProject-class
PFIMProject-class	PFIMProject-class
PGBOAlgorithm	PGBOAlgorithm-class
PGBOAlgorithm-class	PGBOAlgorithm-class
PlotEvaluation	PlotEvaluation-class
plotEvaluation	plotEvaluation
plotEvaluation,Evaluation-method	plotEvaluation
PlotEvaluation-class	PlotEvaluation-class
plotFrequencies	plotFrequencies
plotFrequencies,FedorovWynnAlgorithm-method	plotFrequencies
plotFrequencies,Optimization-method	plotFrequencies
plotOutcomesEvaluation	plotOutcomesEvaluation
plotOutcomesEvaluation,Design-method	plotOutcomesEvaluation
plotOutcomesGradient	plotOutcomesGradient
plotOutcomesGradient,Design-method	plotOutcomesGradient
plotRSE	plotRSE
plotRSE,PFIMProject-method	plotRSE
plotSE	plotSE
plotSE,PFIMProject-method	plotSE
plotSensitivityIndice	plotSensitivityIndice
plotSensitivityIndice,Evaluation-method	plotSensitivityIndice
plotShrinkage	plotShrinkage
plotShrinkage,PFIMProject-method	plotShrinkage
plotWeights	plotWeights
plotWeights,MultiplicativeAlgorithm-method	plotWeights
plotWeights,Optimization-method	plotWeights
PopulationFim	PopulationFim-class
PopulationFim-class	PopulationFim-class
Proportional	Proportional-class
Proportional-class	Proportional-class
PSOAlgorithm	PSOAlgorithm-class
PSOAlgorithm-class	PSOAlgorithm-class
Report	Report
Report,Evaluation-method	Report
Report,Optimization-method	Report
reportTablesAdministration	reportTablesAdministration
reportTablesAdministration,Design-method	reportTablesAdministration
reportTablesDesign	reportTablesDesign
reportTablesDesign,Design-method	reportTablesDesign
reportTablesFIM	reportTablesFIM
reportTablesFIM,BayesianFim-method	reportTablesFIM
reportTablesFIM,IndividualFim-method	reportTablesFIM
reportTablesFIM,PopulationFim-method	reportTablesFIM
reportTablesModelError	reportTablesModelError
reportTablesModelError,Model-method	reportTablesModelError
reportTablesModelParameters	reportTablesModelParameters
reportTablesModelParameters,Model-method	reportTablesModelParameters
reportTablesPlot	reportTablesPlot
reportTablesPlot,Evaluation-method	reportTablesPlot
reportTablesSamplingConstraints	reportTablesSamplingConstraints
reportTablesSamplingConstraints,Design-method	reportTablesSamplingConstraints
resizeFisherMatrix	resizeFisherMatrix
resizeFisherMatrix,ANY-method	resizeFisherMatrix
run	run
run,Evaluation-method	run
run,Optimization-method	run
SamplingTimeConstraints	SamplingTimeConstraints-class
SamplingTimeConstraints-class	SamplingTimeConstraints-class
SamplingTimes	SamplingTimes-class
SamplingTimes-class	SamplingTimes-class
setAdministrations	setAdministrations
setAdministrations,Arm-method	setAdministrations
setArm	setArm
setArm,Design-method	setArm
setArms	setArms
setArms,Design-method	setArms
setArms,OptimizationAlgorithm-method	setArms
setcError	setcError
setcError,ModelError-method	setcError
setContent	setContent
setContent,LibraryOfModels-method	setContent
setDataForArmEvaluation	setDataForArmEvaluation
setDataForArmEvaluation,Arm-method	setDataForArmEvaluation
setDataForModelEvaluation	setDataForModelEvaluation
setDataForModelEvaluation,ModelAnalytic-method	setDataForModelEvaluation
setDataForModelEvaluation,ModelAnalyticInfusion-method	setDataForModelEvaluation
setDataForModelEvaluation,ModelAnalyticInfusionSteadyState-method	setDataForModelEvaluation
setDataForModelEvaluation,ModelAnalyticSteadyState-method	setDataForModelEvaluation
setDataForModelEvaluation,ModelODEBolus-method	setDataForModelEvaluation
setDataForModelEvaluation,ModelODEDoseInEquations-method	setDataForModelEvaluation
setDataForModelEvaluation,ModelODEDoseNotInEquations-method	setDataForModelEvaluation
setDataForModelEvaluation,ModelODEInfusionDoseInEquations-method	setDataForModelEvaluation
setDerivatives	setDerivatives
setDerivatives,ModelError-method	setDerivatives
setDescription	setDescription
setDescription,Model-method	setDescription
setDesigns	setDesigns
setDesigns,Optimization-method	setDesigns
setDistribution	setDistribution
setDistribution,ModelParameter-method	setDistribution
setDose	setDose
setDose,Administration-method	setDose
setEquation	setEquation
setEquation,ModelError-method	setEquation
setEquations	setEquations
setEquations,Model-method	setEquations
setEquationsAfterInfusion	setEquationsAfterInfusion
setEquationsAfterInfusion,Model-method	setEquationsAfterInfusion
setEquationsDuringInfusion	setEquationsDuringInfusion
setEquationsDuringInfusion,Model-method	setEquationsDuringInfusion
setEvaluationFIMResults	setEvaluationFIMResults
setEvaluationFIMResults,Optimization-method	setEvaluationFIMResults
setEvaluationInitialDesignResults	setEvaluationInitialDesignResults
setEvaluationInitialDesignResults,Optimization-method	setEvaluationInitialDesignResults
setFim	setFim
setFim,Design-method	setFim
setFimTypeToString	setFimTypeToString
setFimTypeToString,Fim-method	setFimTypeToString
setFisherMatrix	setFisherMatrix
setFisherMatrix,Fim-method	setFisherMatrix
setFixedEffects	setFixedEffects
setFixedEffects,Fim-method	setFixedEffects
setFixedMu	setFixedMu
setFixedMu,ModelParameter-method	setFixedMu
setFixedOmega	setFixedOmega
setFixedOmega,ModelParameter-method	setFixedOmega
setInitialConditions	setInitialConditions
setInitialConditions,Arm-method	setInitialConditions
setInitialConditions,Model-method	setInitialConditions
setIterationAndCriteria	setIterationAndCriteria
setIterationAndCriteria,OptimizationAlgorithm-method	setIterationAndCriteria
setModel	setModel
setModel,PFIMProject-method	setModel
setModelError	setModelError
setModelError,Model-method	setModelError
setModelFromLibrary	setModelFromLibrary
setModelFromLibrary,Model-method	setModelFromLibrary
setMu	setMu
setMu,Distribution-method	setMu
setMu,ModelParameter-method	setMu
setName	setName
setName,Arm-method	setName
setName,Design-method	setName
setName,Model-method	setName
setNumberOfArms	setNumberOfArms
setNumberOfArms,Design-method	setNumberOfArms
setOdeSolverParameters	setOdeSolverParameters
setOdeSolverParameters,Model-method	setOdeSolverParameters
setOmega	setOmega
setOmega,Distribution-method	setOmega
setOmega,ModelParameter-method	setOmega
setOptimalDesign	setOptimalDesign
setOptimalDesign,OptimizationAlgorithm-method	setOptimalDesign
setOptimalWeights	setOptimalWeights
setOptimalWeights,MultiplicativeAlgorithm-method	setOptimalWeights
setOptimizationResults	setOptimizationResults
setOptimizationResults,Optimization-method	setOptimizationResults
setOutcome	setOutcome
setOutcome,Administration-method	setOutcome
setOutcome,SamplingTimes-method	setOutcome
setOutcomes	setOutcomes
setOutcomes,Model-method	setOutcomes
setOutcomesEvaluation	setOutcomesEvaluation
setOutcomesEvaluation,Design-method	setOutcomesEvaluation
setOutcomesForEvaluation	setOutcomesForEvaluation
setOutcomesForEvaluation,Model-method	setOutcomesForEvaluation
setOutcomesGradient	setOutcomesGradient
setOutcomesGradient,Design-method	setOutcomesGradient
setParameters	setParameters
setParameters,Distribution-method	setParameters
setParameters,FedorovWynnAlgorithm-method	setParameters
setParameters,Model-method	setParameters
setParameters,MultiplicativeAlgorithm-method	setParameters
setParameters,PGBOAlgorithm-method	setParameters
setParameters,PSOAlgorithm-method	setParameters
setParameters,SimplexAlgorithm-method	setParameters
setSamplingConstraintForOptimization	setSamplingConstraintForOptimization
setSamplingConstraintForOptimization,Design-method	setSamplingConstraintForOptimization
setSamplings	setSamplings
setSamplings,SamplingTimes-method	setSamplings
setSamplingTime	setSamplingTime
setSamplingTime,Arm-method	setSamplingTime
setSamplingTimes	setSamplingTimes
setSamplingTimes,Arm-method	setSamplingTimes
setSamplingTimesConstraints	setSamplingTimesConstraints
setSamplingTimesConstraints,Arm-method	setSamplingTimesConstraints
setShrinkage	setShrinkage
setShrinkage,BayesianFim-method	setShrinkage
setShrinkage,IndividualFim-method	setShrinkage
setShrinkage,PopulationFim-method	setShrinkage
setSigmaInter	setSigmaInter
setSigmaInter,ModelError-method	setSigmaInter
setSigmaSlope	setSigmaSlope
setSigmaSlope,ModelError-method	setSigmaSlope
setSize	setSize
setSize,Arm-method	setSize
setSize,Design-method	setSize
setTau	setTau
setTau,Administration-method	setTau
setTimeDose	setTimeDose
setTimeDose,Administration-method	setTimeDose
setTinf	setTinf
setTinf,Administration-method	setTinf
setVarianceEffects	setVarianceEffects
setVarianceEffects,Fim-method	setVarianceEffects
show,Design-method	show
show,Evaluation-method	show
show,FedorovWynnAlgorithm-method	show
show,MultiplicativeAlgorithm-method	show
show,Optimization-method	show
show,PGBOAlgorithm-method	show
show,PSOAlgorithm-method	show
show,SimplexAlgorithm-method	show
SimplexAlgorithm	SimplexAlgorithm-class
SimplexAlgorithm-class	SimplexAlgorithm-class
