This vignette provide installation for mixKernel
instructions.
Installation of python dependencies
The following python modules are required for the functions
performing feature selection in mixKernel: autograd, scipy,
sklearn, numpy
pip3 install autograd
pip3 install scipy
pip3 install sklearn
pip3 install numpy
Installation of Bioconductor dependencies
Two Bioconductor packages are required for mixKernel
installation: mixOmics and phyloseq:
install.packages("BiocManager")
BiocManager::install("mixOmics")
BiocManager::install("phyloseq")
mixKernel installation
Finally the installation is completed with:
install.packages("mixKernel")