Topological Data Analysis: Mapper Algorithm

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Documentation for package ‘MapperAlgo’ version 1.0.1

• DESCRIPTION file.

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cluster_cutoff_at_first_empty_bin	Cut the hierarchical clustering tree to define clusters
cover_points	Cover points based on intervals and overlap
find_best_k_for_kmeans	Find the optimal number of clusters for k-means
MapperAlgo	Mapper Algorithm
mapperEdges	Create Mapper Edges
mapperVertices	Create Mapper Vertices
perform_clustering	Perform clustering within a level set
simplcial_complex	Construct adjacency matrix of the simplicial complex
to_lsfi	Convert level set multi-index (lsmi) to flat index (lsfi)
to_lsmi	Convert level set flat index (lsfi) to multi-index (lsmi)