seqminer-package	SEQMINER
addJob	addJob
annotateGene	annotateGene
annotatePlain	annotatePlain
annotateVcf	annotateVcf
createSingleChromosomeBCFIndex	createSingleChromosomeBCFIndex
createSingleChromosomeVCFIndex	createSingleChromosomeVCFIndex
download.annotation.resource	download.annotation.resource
getCovPair	getCovPair
getRefBase	getRefBase
hasIndex	hasIndex
isDirWritable	isDirWritable
isInRange	isInRange
isTabixRange	isTabixRange
isURL	isURL
makeAnnotationParameter	makeAnnotationParameter
newJob	newJob
newWorkflow	newWorkflow
openPlink	openPlink
readBGENToListByGene	readBGENToListByGene
readBGENToListByRange	readBGENToListByRange
readBGENToMatrixByGene	readBGENToMatrixByGene
readBGENToMatrixByRange	readBGENToMatrixByRange
readPlinkToMatrixByIndex	readPlinkToMatrixByIndex
readSingleChromosomeBCFToMatrixByRange	readSingleChromosomeBCFToMatrixByRange
readSingleChromosomeVCFToMatrixByRange	readSingleChromosomeVCFToMatrixByRange
readVCFToListByGene	readVCFToListByGene
readVCFToListByRange	readVCFToListByRange
readVCFToMatrixByGene	readVCFToMatrixByGene
readVCFToMatrixByRange	readVCFToMatrixByRange
rvmeta.readCovByRange	rvmeta.readCovByRange
rvmeta.readDataByGene	rvmeta.readDataByGene
rvmeta.readDataByRange	rvmeta.readDataByRange
rvmeta.readNullModel	rvmeta.readNullModel
rvmeta.readScoreByRange	rvmeta.readScoreByRange
rvmeta.readSkewByRange	rvmeta.readSkewByRange
rvmeta.writeCovData	rvmeta.writeCovData
rvmeta.writeScoreData	rvmeta.writeScoreData
seqminer	SEQMINER
tabix.createIndex	tabix.createIndex
tabix.createIndex.meta	tabix.createIndex.meta
tabix.createIndex.vcf	tabix.createIndex.vcf
tabix.read	tabix.read
tabix.read.header	tabix.read.header
tabix.read.table	tabix.read.table
validateAnnotationParameter	validateAnnotationParameter
verifyFilename	verifyFilename
writeWorkflow	writeWorkflow
[.PlinkFile	sub-.PlinkFile
