CRAN Package Check Results for Package data.table

Last updated on 2024-11-23 19:49:22 CET.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-clang 1.16.2 37.25 196.50 233.75 ERROR
r-devel-linux-x86_64-debian-gcc 1.16.2 32.08 155.22 187.30 ERROR
r-devel-linux-x86_64-fedora-clang 1.16.2 427.10 ERROR
r-devel-linux-x86_64-fedora-gcc 1.16.2 415.48 ERROR
r-devel-windows-x86_64 1.16.2 57.00 529.00 586.00 ERROR
r-patched-linux-x86_64 1.16.2 41.87 228.20 270.07 OK
r-release-linux-x86_64 1.16.2 38.84 224.45 263.29 OK
r-release-macos-arm64 1.16.2 142.00 NOTE
r-release-macos-x86_64 1.16.2 279.00 NOTE
r-release-windows-x86_64 1.16.2 62.00 537.00 599.00 OK
r-oldrel-macos-arm64 1.16.2 136.00 NOTE
r-oldrel-macos-x86_64 1.16.2 247.00 NOTE
r-oldrel-windows-x86_64 1.16.2 60.00 700.00 760.00 OK

Check Details

Version: 1.16.2
Check: compiled code
Result: NOTE File ‘data.table/libs/data_table.so’: Found non-API calls to R: ‘LEVELS’, ‘SETLENGTH’, ‘SET_GROWABLE_BIT’, ‘SET_TRUELENGTH’, ‘STRING_PTR’, ‘TRUELENGTH’ Compiled code should not call non-API entry points in R. See ‘Writing portable packages’ in the ‘Writing R Extensions’ manual, and section ‘Moving into C API compliance’ for issues with the use of non-API entry points. Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc

Version: 1.16.2
Check: tests
Result: ERROR Running ‘S4.R’ [1s/1s] Running ‘autoprint.R’ [0s/1s] Comparing ‘autoprint.Rout’ to ‘autoprint.Rout.save’ ... OK Running ‘froll.R’ [23s/32s] Running ‘knitr.R’ [1s/1s] Comparing ‘knitr.Rout’ to ‘knitr.Rout.save’ ... OK Running ‘main.R’ [51s/63s] Running ‘nafill.R’ [1s/1s] Running ‘other.R’ [0s/0s] Running ‘programming.R’ [1s/1s] Running ‘types.R’ [0s/1s] Running the tests in ‘tests/main.R’ failed. Complete output: > require(data.table) Loading required package: data.table > > test.data.table() # runs the main test suite of 5,000+ tests in /inst/tests/tests.Rraw getDTthreads(verbose=TRUE): This installation of data.table has not been compiled with OpenMP support. omp_get_num_procs() 1 R_DATATABLE_NUM_PROCS_PERCENT unset (default 50) R_DATATABLE_NUM_THREADS unset R_DATATABLE_THROTTLE unset (default 1024) omp_get_thread_limit() 1 omp_get_max_threads() 1 OMP_THREAD_LIMIT 3 OMP_NUM_THREADS 3 RestoreAfterFork true data.table is using 1 threads with throttle==1024. See ?setDTthreads. test.data.table() running: /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/data.table/tests/tests.Rraw.bz2 Error in bmerge(i, x, leftcols, rightcols, roll, rollends, nomatch, mult, : typeof x.START_DATE (integer) != typeof i.DATE (double) Thu Nov 21 21:47:57 2024 endian==little, sizeof(long double)==16, longdouble.digits==64, sizeof(pointer)==8, TZ==unset, Sys.timezone()=='Europe/Vienna', Sys.getlocale()=='LC_CTYPE=C.UTF-8;LC_NUMERIC=C;LC_TIME=C.UTF-8;LC_COLLATE=C;LC_MONETARY=C.UTF-8;LC_MESSAGES=C.UTF-8;LC_PAPER=C.UTF-8;LC_NAME=C;LC_ADDRESS=C;LC_TELEPHONE=C;LC_MEASUREMENT=C.UTF-8;LC_IDENTIFICATION=C', l10n_info()=='MBCS=TRUE; UTF-8=TRUE; Latin-1=FALSE; codeset=UTF-8', getDTthreads()=='This installation of data.table has not been compiled with OpenMP support.; omp_get_num_procs()==1; R_DATATABLE_NUM_PROCS_PERCENT==unset (default 50); R_DATATABLE_NUM_THREADS==unset; R_DATATABLE_THROTTLE==unset (default 1024); omp_get_thread_limit()==1; omp_get_max_threads()==1; OMP_THREAD_LIMIT==3; OMP_NUM_THREADS==3; RestoreAfterFork==true; data.table is using 1 threads with throttle==1024. See ?setDTthreads.', .libPaths()=='/home/hornik/tmp/scratch/RtmpB8GVJq/RLIBS_3795f334d5ed70','/home/hornik/tmp/R.check/r-devel-clang/Work/build/library', zlibVersion()==1.3.1 ZLIB_VERSION==1.3.1 Error in test.data.table() : Failed in 00:01:02 elapsed (50.7s cpu) after test 1847.3 before the next test() call in /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/data.table/tests/tests.Rraw.bz2 Calls: test.data.table -> stopf -> raise_condition -> signal Execution halted Flavor: r-devel-linux-x86_64-debian-clang

Version: 1.16.2
Check: tests
Result: ERROR Running ‘S4.R’ [0s/1s] Running ‘autoprint.R’ [0s/0s] Comparing ‘autoprint.Rout’ to ‘autoprint.Rout.save’ ... OK Running ‘froll.R’ [14s/16s] Running ‘knitr.R’ [0s/0s] Comparing ‘knitr.Rout’ to ‘knitr.Rout.save’ ... OK Running ‘main.R’ [53s/50s] Running ‘nafill.R’ [1s/1s] Running ‘other.R’ [0s/0s] Running ‘programming.R’ [1s/1s] Running ‘types.R’ [0s/1s] Running the tests in ‘tests/main.R’ failed. Complete output: > require(data.table) Loading required package: data.table > > test.data.table() # runs the main test suite of 5,000+ tests in /inst/tests/tests.Rraw getDTthreads(verbose=TRUE): OpenMP version (_OPENMP) 201511 omp_get_num_procs() 64 R_DATATABLE_NUM_PROCS_PERCENT unset (default 50) R_DATATABLE_NUM_THREADS unset R_DATATABLE_THROTTLE unset (default 1024) omp_get_thread_limit() 3 omp_get_max_threads() 3 OMP_THREAD_LIMIT 3 OMP_NUM_THREADS 3 RestoreAfterFork true data.table is using 3 threads with throttle==1024. See ?setDTthreads. test.data.table() running: /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/data.table/tests/tests.Rraw.bz2 Error in bmerge(i, x, leftcols, rightcols, roll, rollends, nomatch, mult, : typeof x.START_DATE (integer) != typeof i.DATE (double) Sat Nov 23 14:59:26 2024 endian==little, sizeof(long double)==16, longdouble.digits==64, sizeof(pointer)==8, TZ==unset, Sys.timezone()=='Europe/Vienna', Sys.getlocale()=='LC_CTYPE=C.UTF-8;LC_NUMERIC=C;LC_TIME=C.UTF-8;LC_COLLATE=C;LC_MONETARY=C.UTF-8;LC_MESSAGES=C.UTF-8;LC_PAPER=C.UTF-8;LC_NAME=C;LC_ADDRESS=C;LC_TELEPHONE=C;LC_MEASUREMENT=C.UTF-8;LC_IDENTIFICATION=C', l10n_info()=='MBCS=TRUE; UTF-8=TRUE; Latin-1=FALSE; codeset=UTF-8', getDTthreads()=='OpenMP version (_OPENMP)==201511; omp_get_num_procs()==64; R_DATATABLE_NUM_PROCS_PERCENT==unset (default 50); R_DATATABLE_NUM_THREADS==unset; R_DATATABLE_THROTTLE==unset (default 1024); omp_get_thread_limit()==3; omp_get_max_threads()==3; OMP_THREAD_LIMIT==3; OMP_NUM_THREADS==3; RestoreAfterFork==true; data.table is using 3 threads with throttle==1024. See ?setDTthreads.', .libPaths()=='/tmp/RtmpvWUDqx/RLIBS_179de726929516','/home/hornik/tmp/R.check/r-devel-gcc/Work/build/library', zlibVersion()==1.3.1 ZLIB_VERSION==1.3.1 Error in test.data.table() : Failed in 49.2s elapsed (52.1s cpu) after test 1847.3 before the next test() call in /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/data.table/tests/tests.Rraw.bz2 Calls: test.data.table -> stopf -> raise_condition -> signal Execution halted Flavor: r-devel-linux-x86_64-debian-gcc

Version: 1.16.2
Check: tests
Result: ERROR Running ‘S4.R’ Running ‘autoprint.R’ Comparing ‘autoprint.Rout’ to ‘autoprint.Rout.save’ ... OK Running ‘froll.R’ [52s/76s] Running ‘knitr.R’ Comparing ‘knitr.Rout’ to ‘knitr.Rout.save’ ... OK Running ‘main.R’ [104s/180s] Running ‘nafill.R’ Running ‘other.R’ Running ‘programming.R’ Running ‘types.R’ Running the tests in ‘tests/main.R’ failed. Complete output: > require(data.table) Loading required package: data.table > > test.data.table() # runs the main test suite of 5,000+ tests in /inst/tests/tests.Rraw getDTthreads(verbose=TRUE): OpenMP version (_OPENMP) 202011 omp_get_num_procs() 24 R_DATATABLE_NUM_PROCS_PERCENT unset (default 50) R_DATATABLE_NUM_THREADS unset R_DATATABLE_THROTTLE unset (default 1024) omp_get_thread_limit() 2 omp_get_max_threads() 24 OMP_THREAD_LIMIT 2 OMP_NUM_THREADS unset RestoreAfterFork true data.table is using 2 threads with throttle==1024. See ?setDTthreads. test.data.table() running: /data/gannet/ripley/R/packages/tests-clang/data.table.Rcheck/data.table/tests/tests.Rraw.bz2 Error in bmerge(i, x, leftcols, rightcols, roll, rollends, nomatch, mult, : typeof x.START_DATE (integer) != typeof i.DATE (double) Mon Nov 11 07:46:58 2024 endian==little, sizeof(long double)==16, longdouble.digits==64, sizeof(pointer)==8, TZ==unset, Sys.timezone()=='Europe/London', Sys.getlocale()=='LC_CTYPE=en_GB.utf8;LC_NUMERIC=C;LC_TIME=en_GB.UTF-8;LC_COLLATE=C;LC_MONETARY=en_GB.UTF-8;LC_MESSAGES=en_GB.UTF-8;LC_PAPER=en_GB.UTF-8;LC_NAME=C;LC_ADDRESS=C;LC_TELEPHONE=C;LC_MEASUREMENT=en_GB.UTF-8;LC_IDENTIFICATION=C', l10n_info()=='MBCS=TRUE; UTF-8=TRUE; Latin-1=FALSE; codeset=UTF-8', getDTthreads()=='OpenMP version (_OPENMP)==202011; omp_get_num_procs()==24; R_DATATABLE_NUM_PROCS_PERCENT==unset (default 50); R_DATATABLE_NUM_THREADS==unset; R_DATATABLE_THROTTLE==unset (default 1024); omp_get_thread_limit()==2; omp_get_max_threads()==24; OMP_THREAD_LIMIT==2; OMP_NUM_THREADS==unset; RestoreAfterFork==true; data.table is using 2 threads with throttle==1024. See ?setDTthreads.', .libPaths()=='/tmp/RtmpOnVx9K/RLIBS_3bf6321684e1c8','/data/gannet/ripley/R/R-clang/library', zlibVersion()==1.2.11 ZLIB_VERSION==1.2.11 Error in test.data.table() : Failed in 00:02:58 elapsed (00:01:40 cpu) after test 1847.3 before the next test() call in /data/gannet/ripley/R/packages/tests-clang/data.table.Rcheck/data.table/tests/tests.Rraw.bz2 Calls: test.data.table -> stopf -> raise_condition -> signal Execution halted Flavor: r-devel-linux-x86_64-fedora-clang

Version: 1.16.2
Check: tests
Result: ERROR Running ‘S4.R’ Running ‘autoprint.R’ Comparing ‘autoprint.Rout’ to ‘autoprint.Rout.save’ ... OK Running ‘froll.R’ [39s/48s] Running ‘knitr.R’ Comparing ‘knitr.Rout’ to ‘knitr.Rout.save’ ... OK Running ‘main.R’ [87s/100s] Running ‘nafill.R’ Running ‘other.R’ Running ‘programming.R’ Running ‘types.R’ Running the tests in ‘tests/main.R’ failed. Complete output: > require(data.table) Loading required package: data.table > > test.data.table() # runs the main test suite of 5,000+ tests in /inst/tests/tests.Rraw getDTthreads(verbose=TRUE): OpenMP version (_OPENMP) 201511 omp_get_num_procs() 24 R_DATATABLE_NUM_PROCS_PERCENT unset (default 50) R_DATATABLE_NUM_THREADS unset R_DATATABLE_THROTTLE unset (default 1024) omp_get_thread_limit() 2 omp_get_max_threads() 24 OMP_THREAD_LIMIT 2 OMP_NUM_THREADS unset RestoreAfterFork true data.table is using 2 threads with throttle==1024. See ?setDTthreads. test.data.table() running: /data/gannet/ripley/R/packages/tests-devel/data.table.Rcheck/data.table/tests/tests.Rraw.bz2 Error in bmerge(i, x, leftcols, rightcols, roll, rollends, nomatch, mult, : typeof x.START_DATE (integer) != typeof i.DATE (double) Sat Nov 16 23:25:43 2024 endian==little, sizeof(long double)==16, longdouble.digits==64, sizeof(pointer)==8, TZ==unset, Sys.timezone()=='Europe/London', Sys.getlocale()=='LC_CTYPE=en_GB.utf8;LC_NUMERIC=C;LC_TIME=en_GB.UTF-8;LC_COLLATE=C;LC_MONETARY=en_GB.UTF-8;LC_MESSAGES=en_GB.UTF-8;LC_PAPER=en_GB.UTF-8;LC_NAME=C;LC_ADDRESS=C;LC_TELEPHONE=C;LC_MEASUREMENT=en_GB.UTF-8;LC_IDENTIFICATION=C', l10n_info()=='MBCS=TRUE; UTF-8=TRUE; Latin-1=FALSE; codeset=UTF-8', getDTthreads()=='OpenMP version (_OPENMP)==201511; omp_get_num_procs()==24; R_DATATABLE_NUM_PROCS_PERCENT==unset (default 50); R_DATATABLE_NUM_THREADS==unset; R_DATATABLE_THROTTLE==unset (default 1024); omp_get_thread_limit()==2; omp_get_max_threads()==24; OMP_THREAD_LIMIT==2; OMP_NUM_THREADS==unset; RestoreAfterFork==true; data.table is using 2 threads with throttle==1024. See ?setDTthreads.', .libPaths()=='/data/gannet/ripley/R/packages/tests-devel/data.table.Rcheck','/data/gannet/ripley/R/test-dev','/data/gannet/ripley/R/test-BioCdata','/data/gannet/ripley/R/R-devel/library', zlibVersion()==1.2.11 ZLIB_VERSION==1.2.11 Error in test.data.table() : Failed in 00:01:38 elapsed (00:01:25 cpu) after test 1847.3 before the next test() call in /data/gannet/ripley/R/packages/tests-devel/data.table.Rcheck/data.table/tests/tests.Rraw.bz2 Calls: test.data.table -> stopf -> raise_condition -> signal Execution halted Flavor: r-devel-linux-x86_64-fedora-gcc

Version: 1.16.2
Check: compiled code
Result: NOTE File 'data.table/libs/x64/data_table.dll': Found non-API calls to R: 'LEVELS', 'SETLENGTH', 'SET_GROWABLE_BIT', 'SET_TRUELENGTH', 'STRING_PTR', 'TRUELENGTH' Compiled code should not call non-API entry points in R. See 'Writing portable packages' in the 'Writing R Extensions' manual, and section 'Moving into C API compliance' for issues with the use of non-API entry points. Flavor: r-devel-windows-x86_64

Version: 1.16.2
Check: tests
Result: ERROR Running 'S4.R' [1s] Running 'autoprint.R' [0s] Comparing 'autoprint.Rout' to 'autoprint.Rout.save' ... OK Running 'froll.R' [19s] Running 'knitr.R' [0s] Comparing 'knitr.Rout' to 'knitr.Rout.save' ... OK Running 'main.R' [353s] Running 'nafill.R' [1s] Running 'other.R' [0s] Running 'programming.R' [1s] Running 'types.R' [0s] Running the tests in 'tests/main.R' failed. Complete output: > require(data.table) Loading required package: data.table > > test.data.table() # runs the main test suite of 5,000+ tests in /inst/tests/tests.Rraw getDTthreads(verbose=TRUE): OpenMP version (_OPENMP) 201511 omp_get_num_procs() 48 R_DATATABLE_NUM_PROCS_PERCENT unset (default 50) R_DATATABLE_NUM_THREADS unset R_DATATABLE_THROTTLE unset (default 1024) omp_get_thread_limit() 2 omp_get_max_threads() 48 OMP_THREAD_LIMIT 2 OMP_NUM_THREADS unset RestoreAfterFork true data.table is using 2 threads with throttle==1024. See ?setDTthreads. test.data.table() running: D:/RCompile/CRANpkg/lib/4.5/data.table/tests/tests.Rraw.bz2 Error in bmerge(i, x, leftcols, rightcols, roll, rollends, nomatch, mult, : typeof x.START_DATE (integer) != typeof i.DATE (double) Thu Nov 21 08:22:07 2024 endian==little, sizeof(long double)==16, longdouble.digits==64, sizeof(pointer)==8, TZ==unset, Sys.timezone()=='Europe/Berlin', Sys.getlocale()=='LC_COLLATE=C;LC_CTYPE=German_Germany.utf8;LC_MONETARY=C;LC_NUMERIC=C;LC_TIME=C', l10n_info()=='MBCS=TRUE; UTF-8=TRUE; Latin-1=FALSE; codepage=65001; system.codepage=65001', getDTthreads()=='OpenMP version (_OPENMP)==201511; omp_get_num_procs()==48; R_DATATABLE_NUM_PROCS_PERCENT==unset (default 50); R_DATATABLE_NUM_THREADS==unset; R_DATATABLE_THROTTLE==unset (default 1024); omp_get_thread_limit()==2; omp_get_max_threads()==48; OMP_THREAD_LIMIT==2; OMP_NUM_THREADS==unset; RestoreAfterFork==true; data.table is using 2 threads with throttle==1024. See ?setDTthreads.', .libPaths()=='D:/temp/2024_11_21_01_50_00_28815/RtmpGIva0G/RLIBS_17ab016731d06','D:/RCompile/recent/R/library', zlibVersion()==1.3.1 ZLIB_VERSION==1.3.1 Error in test.data.table() : Failed in 00:05:52 elapsed (00:01:11 cpu) after test 1847.3 before the next test() call in D:/RCompile/CRANpkg/lib/4.5/data.table/tests/tests.Rraw.bz2 Calls: test.data.table -> stopf -> raise_condition -> signal Execution halted Flavor: r-devel-windows-x86_64

Version: 1.16.2
Check: installed package size
Result: NOTE installed size is 5.6Mb sub-directories of 1Mb or more: libs 1.8Mb Flavors: r-release-macos-arm64, r-release-macos-x86_64, r-oldrel-macos-arm64, r-oldrel-macos-x86_64