CRAN Package Check Results for Package gimap

Last updated on 2025-02-06 19:49:24 CET.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-gcc 1.0.1 4.97 59.14 64.11 ERROR
r-devel-linux-x86_64-fedora-clang 1.0.1 145.28 OK
r-devel-linux-x86_64-fedora-gcc 1.0.1 152.30 OK
r-patched-linux-x86_64 1.0.1 7.61 74.41 82.02 ERROR
r-release-linux-x86_64 1.0.1 6.90 73.73 80.63 ERROR
r-release-macos-arm64 1.0.1 68.00 OK
r-release-macos-x86_64 1.0.1 120.00 OK
r-release-windows-x86_64 1.0.1 12.00 98.00 110.00 OK
r-oldrel-windows-x86_64 1.0.1 10.00 116.00 126.00 OK

Additional issues

rlibro

Check Details

Version: 1.0.1
Check: examples
Result: ERROR Running examples in ‘gimap-Ex.R’ failed The error most likely occurred in: > base::assign(".ptime", proc.time(), pos = "CheckExEnv") > ### Name: setup_data > ### Title: Making a new gimap dataset > ### Aliases: setup_data > > ### ** Examples > > > counts <- get_example_data("count") %>% + dplyr::select(c( + "Day00_RepA", "Day05_RepA", "Day22_RepA", "Day22_RepB", + "Day22_RepC" + )) %>% + as.matrix() Downloading: 1.4 kB Downloading: 1.4 kB Downloading: 1.4 kB Downloading: 1.4 kB Downloading: PP_pgPEN_HeLa_counts.txt | | | 0% | |======================================================================| 100% | | | 0% | | | 1% | |= | 1% | |== | 3% | |==== | 6% | |===== | 7% | |======== | 11% | |========= | 14% | |========== | 14% | |========== | 15% | |============ | 17% | |============ | 18% | |============= | 18% | |============== | 20% | |================= | 24% | |=================== | 27% | |==================== | 29% | |===================== | 30% | |====================== | 31% | |====================== | 32% | |======================= | 32% | |======================== | 34% | |======================== | 35% | |========================= | 35% | |========================= | 36% | |========================== | 37% | |=========================== | 38% | |=========================== | 39% | |============================ | 41% | |============================== | 43% | |=============================== | 44% | |================================ | 45% | |================================ | 46% | |================================= | 47% | |================================== | 48% | |=================================== | 50% | |===================================== | 53% | |====================================== | 54% | |========================================= | 58% | |========================================== | 60% | |=========================================== | 61% | |============================================ | 62% | |============================================ | 63% | |============================================= | 64% | |============================================== | 65% | |============================================== | 66% | |=============================================== | 68% | |================================================ | 68% | |================================================ | 69% | |================================================= | 70% | |================================================== | 71% | |================================================== | 72% | |=================================================== | 72% | |====================================================== | 76% | |======================================================== | 80% | |============================================================ | 86% | |=============================================================== | 90% | |================================================================ | 91% | |================================================================= | 93% | |================================================================== | 95% | |=================================================================== | 95% | |=================================================================== | 96% | |==================================================================== | 97% | |==================================================================== | 98% | |===================================================================== | 98% | |======================================================================| 100% Warning in file(con, "w") : cannot open file '/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/gimap/extdata/PP_pgPEN_HeLa_counts.txt': Read-only file system Error in file(con, "w") : cannot open the connection Calls: %>% ... get_example_data -> get_figshare -> writeLines -> file Execution halted Examples with CPU (user + system) or elapsed time > 5s user system elapsed run_qc 3.931 0.325 5.208 Flavor: r-devel-linux-x86_64-debian-gcc

Version: 1.0.1
Check: examples
Result: ERROR Running examples in ‘gimap-Ex.R’ failed The error most likely occurred in: > base::assign(".ptime", proc.time(), pos = "CheckExEnv") > ### Name: setup_data > ### Title: Making a new gimap dataset > ### Aliases: setup_data > > ### ** Examples > > > counts <- get_example_data("count") %>% + dplyr::select(c( + "Day00_RepA", "Day05_RepA", "Day22_RepA", "Day22_RepB", + "Day22_RepC" + )) %>% + as.matrix() Downloading: 1.4 kB Downloading: 1.4 kB Downloading: 1.4 kB Downloading: 1.4 kB Downloading: PP_pgPEN_HeLa_counts.txt | | | 0% | |======================================================================| 100% | | | 0% | | | 1% | |= | 1% | |== | 3% | |=== | 4% | |==== | 6% | |====== | 8% | |======= | 10% | |========= | 12% | |========== | 14% | |============= | 18% | |=============== | 22% | |================== | 26% | |==================== | 29% | |===================== | 30% | |======================== | 34% | |========================== | 37% | |============================= | 41% | |=============================== | 45% | |================================== | 49% | |===================================== | 52% | |===================================== | 53% | |======================================== | 57% | |========================================== | 60% | |============================================= | 64% | |=============================================== | 68% | |================================================== | 71% | |==================================================== | 75% | |======================================================= | 79% | |========================================================= | 82% | |=========================================================== | 84% | |============================================================ | 85% | |============================================================== | 89% | |================================================================ | 92% | |=================================================================== | 96% | |===================================================================== | 99% | |======================================================================| 100% Warning in file(con, "w") : cannot open file '/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/gimap/extdata/PP_pgPEN_HeLa_counts.txt': Read-only file system Error in file(con, "w") : cannot open the connection Calls: %>% ... get_example_data -> get_figshare -> writeLines -> file Execution halted Flavor: r-patched-linux-x86_64

Version: 1.0.1
Check: examples
Result: ERROR Running examples in ‘gimap-Ex.R’ failed The error most likely occurred in: > base::assign(".ptime", proc.time(), pos = "CheckExEnv") > ### Name: setup_data > ### Title: Making a new gimap dataset > ### Aliases: setup_data > > ### ** Examples > > > counts <- get_example_data("count") %>% + dplyr::select(c( + "Day00_RepA", "Day05_RepA", "Day22_RepA", "Day22_RepB", + "Day22_RepC" + )) %>% + as.matrix() Downloading: 1.4 kB Downloading: 1.4 kB Downloading: 1.4 kB Downloading: 1.4 kB Downloading: PP_pgPEN_HeLa_counts.txt | | | 0% | |======================================================================| 100% | | | 0% | | | 1% | |== | 3% | |==== | 6% | |===== | 7% | |====== | 8% | |====== | 9% | |========= | 12% | |========= | 13% | |============ | 17% | |============== | 20% | |================= | 24% | |=================== | 27% | |==================== | 28% | |======================= | 32% | |========================= | 36% | |============================ | 40% | |============================== | 43% | |================================= | 47% | |==================================== | 51% | |====================================== | 55% | |======================================= | 56% | |========================================== | 60% | |============================================ | 63% | |=============================================== | 67% | |================================================= | 70% | |==================================================== | 74% | |======================================================= | 78% | |========================================================= | 82% | |============================================================ | 85% | |============================================================ | 86% | |============================================================= | 87% | |============================================================== | 88% | |================================================================ | 92% | |=================================================================== | 96% | |======================================================================| 100% Warning in file(con, "w") : cannot open file '/home/hornik/tmp/R.check/r-release-gcc/Work/build/Packages/gimap/extdata/PP_pgPEN_HeLa_counts.txt': Read-only file system Error in file(con, "w") : cannot open the connection Calls: %>% ... get_example_data -> get_figshare -> writeLines -> file Execution halted Flavor: r-release-linux-x86_64