BioPred: An R Package for Biomarkers Analysis in Precision Medicine

Provides functions for training extreme gradient boosting model using propensity score A-learning and weight-learning methods. For further details, see Liu et al. (2024) <doi:10.1093/bioinformatics/btae592>.

Version:	1.0.2
Depends:	R (≥ 4.0.0)
Imports:	xgboost, pROC, ggplot2, PropCIs, survival, survminer, mgcv, onewaytests, car
Suggests:	knitr, rmarkdown, kableExtra
Published:	2024-11-04
Author:	Zihuan Liu [aut, cre], Yan Sun [aut], Xin Huang [aut]
Maintainer:	Zihuan Liu <zihuan.liu at abbvie.com>
License:	GPL-3
NeedsCompilation:	no
Language:	en
Materials:	README
CRAN checks:	BioPred results

Documentation:

Reference manual:	BioPred.pdf
Vignettes:	BioPred Package Tutorial (source, R code)

Downloads:

Package source:	BioPred_1.0.2.tar.gz
Windows binaries:	r-devel: BioPred_1.0.1.zip, r-release: BioPred_1.0.1.zip, r-oldrel: BioPred_1.0.1.zip
macOS binaries:	r-release (arm64): BioPred_1.0.2.tgz, r-oldrel (arm64): BioPred_1.0.2.tgz, r-release (x86_64): BioPred_1.0.2.tgz, r-oldrel (x86_64): BioPred_1.0.2.tgz
Old sources:	BioPred archive

Linking:

Please use the canonical form https://CRAN.R-project.org/package=BioPred to link to this page.