Deconvolution of mixed tumour profiles into normal and cancer for each patient, using the ISOpure algorithm in Quon et al. Genome Medicine, 2013 5:29. Deconvolution requires mixed tumour profiles and a set of unmatched "basis" normal profiles.
Version: | 1.1.3 |
Depends: | R (≥ 3.1.1) |
Imports: | Rcpp (≥ 0.11.3), stats, futile.logger |
LinkingTo: | Rcpp, RcppEigen (≥ 0.3.2.2.0) |
Suggests: | knitr |
Published: | 2019-05-11 |
DOI: | 10.32614/CRAN.package.ISOpureR |
Author: | Gerald Quon [aut], Catalina V Anghel [aut, trl], Syed Haider [aut], Francis Nguyen [aut], Amit G Deshwar [aut], Quaid D Morris [aut], Paul C Boutros [aut, cre] |
Maintainer: | Paul C Boutros <pboutros at mednet.ucla.edu> |
License: | GPL-2 |
NeedsCompilation: | yes |
Materials: | NEWS |
CRAN checks: | ISOpureR results |
Reference manual: | ISOpureR.pdf |
Vignettes: |
Guide for using ISOpureR |
Package source: | ISOpureR_1.1.3.tar.gz |
Windows binaries: | r-devel: ISOpureR_1.1.3.zip, r-release: ISOpureR_1.1.3.zip, r-oldrel: ISOpureR_1.1.3.zip |
macOS binaries: | r-release (arm64): ISOpureR_1.1.3.tgz, r-oldrel (arm64): ISOpureR_1.1.3.tgz, r-release (x86_64): ISOpureR_1.1.3.tgz, r-oldrel (x86_64): ISOpureR_1.1.3.tgz |
Old sources: | ISOpureR archive |
Please use the canonical form https://CRAN.R-project.org/package=ISOpureR to link to this page.