IsoriX: Isoscape Computation and Inference of Spatial Origins using Mixed Models

Building isoscapes using mixed models and inferring the geographic origin of samples based on their isotopic ratios. This package is essentially a simplified interface to several other packages which implements a new statistical framework based on mixed models. It uses 'spaMM' for fitting and predicting isoscapes, and assigning an organism's origin depending on its isotopic ratio. 'IsoriX' also relies heavily on the package 'rasterVis' for plotting the maps produced with 'terra' using 'lattice'.

Version: 0.9.3
Depends: R (≥ 3.5.0)
Imports: graphics, grDevices, grid, lattice (≥ 0.22-2), latticeExtra, methods, numDeriv, rasterVis (≥ 0.51.6), spaMM (≥ 3.13), stats, terra, tools, utils, viridisLite
Suggests: colorspace, elevatr, gmp, magick, rgl, spelling, testthat, webshot2, withr
Published: 2024-09-08
DOI: 10.32614/CRAN.package.IsoriX
Author: Alexandre Courtiol ORCID iD [aut, cre], François Rousset ORCID iD [aut], Marie-Sophie Rohwaeder [aut], Stephanie Kramer-Schadt ORCID iD [aut]
Maintainer: Alexandre Courtiol <alexandre.courtiol at gmail.com>
BugReports: https://github.com/courtiol/IsoriX/issues
License: GPL-2 | GPL-3 [expanded from: GPL (≥ 2)]
URL: https://github.com/courtiol/IsoriX, https://bookdown.org/content/782
NeedsCompilation: no
Language: en-GB
Citation: IsoriX citation info
Materials: NEWS
CRAN checks: IsoriX results

Documentation:

Reference manual: IsoriX.pdf

Downloads:

Package source: IsoriX_0.9.3.tar.gz
Windows binaries: r-devel: IsoriX_0.9.3.zip, r-release: IsoriX_0.9.3.zip, r-oldrel: IsoriX_0.9.3.zip
macOS binaries: r-release (arm64): IsoriX_0.9.3.tgz, r-oldrel (arm64): IsoriX_0.9.3.tgz, r-release (x86_64): IsoriX_0.9.3.tgz, r-oldrel (x86_64): IsoriX_0.9.3.tgz
Old sources: IsoriX archive

Reverse dependencies:

Reverse suggests: spaMM

Linking:

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