Provides access to the 'LDlink' API (<https://ldlink.nih.gov/?tab=apiaccess>) using the R console. This programmatic access facilitates researchers who are interested in performing batch queries in 1000 Genomes Project (2015) <doi:10.1038/nature15393> data using 'LDlink'. 'LDlink' is an interactive and powerful suite of web-based tools for querying germline variants in human population groups of interest. For more details, please see Machiela et al. (2015) <doi:10.1093/bioinformatics/btv402>.
Version: | 1.4.0 |
Imports: | httr (≥ 1.4.0), utils (≥ 3.4.2) |
Suggests: | testthat, knitr, rmarkdown, spelling |
Published: | 2024-04-10 |
DOI: | 10.32614/CRAN.package.LDlinkR |
Author: | Timothy A. Myers [aut, cre], Stephen J. Chanock [aut], Mitchell J. Machiela [aut] |
Maintainer: | Timothy A. Myers <myersta at mail.nih.gov> |
BugReports: | https://github.com/CBIIT/LDlinkR/issues |
License: | GPL-2 | GPL-3 [expanded from: GPL (≥ 2)] |
URL: | https://ldlink.nih.gov |
NeedsCompilation: | no |
Language: | en-US |
Citation: | LDlinkR citation info |
Materials: | README NEWS |
CRAN checks: | LDlinkR results |
Reference manual: | LDlinkR.pdf |
Vignettes: |
*LDlinkR*: An R Package for Rapidly Calculating Linkage Disequilibrium Statistics in Diverse Populations |
Package source: | LDlinkR_1.4.0.tar.gz |
Windows binaries: | r-devel: LDlinkR_1.4.0.zip, r-release: LDlinkR_1.4.0.zip, r-oldrel: LDlinkR_1.4.0.zip |
macOS binaries: | r-release (arm64): LDlinkR_1.4.0.tgz, r-oldrel (arm64): LDlinkR_1.4.0.tgz, r-release (x86_64): LDlinkR_1.4.0.tgz, r-oldrel (x86_64): LDlinkR_1.4.0.tgz |
Old sources: | LDlinkR archive |
Reverse imports: | locuszoomr |
Reverse suggests: | GRaNIE |
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