PhysActBedRest: Marks Periods of 'Bedrest' in Actigraph Accelerometer Data

Contains a function to categorize accelerometer readings collected in free-living (e.g., for 24 hours/day for 7 days), preprocessed and compressed as counts (unit-less value) in a specified time period termed epoch (e.g., 1 minute) as either bedrest (sleep) or active. The input is a matrix with a timestamp column and a column with number of counts per epoch. The output is the same dataframe with an additional column termed bedrest. In the bedrest column each line (epoch) contains a function-generated classification 'br' or 'a' denoting bedrest/sleep and activity, respectively. The package is designed to be used after wear/nonwear marking function in the 'PhysicalActivity' package. Version 1.1 adds preschool thresholds and corrects for possible errors in algorithm implementation.

Version:	1.1
Depends:	R (≥ 3.5.0), chron, stringr
Imports:	lubridate
Published:	2020-09-14
DOI:	10.32614/CRAN.package.PhysActBedRest
Author:	J. Dustin Tracy, Zhiyi Xu, Sari Acra, Kong Y. Chen, Maciej S. Buchowski, Thomas Donnelly
Maintainer:	J. Dustin Tracy <tracy at chapman.edu>
License:	GPL (≥ 3)
NeedsCompilation:	no
CRAN checks:	PhysActBedRest results

Documentation:

Reference manual:

PhysActBedRest.pdf

Downloads:

Package source:	PhysActBedRest_1.1.tar.gz
Windows binaries:	r-devel: PhysActBedRest_1.1.zip, r-release: PhysActBedRest_1.1.zip, r-oldrel: PhysActBedRest_1.1.zip
macOS binaries:	r-release (arm64): PhysActBedRest_1.1.tgz, r-oldrel (arm64): PhysActBedRest_1.1.tgz, r-release (x86_64): PhysActBedRest_1.1.tgz, r-oldrel (x86_64): PhysActBedRest_1.1.tgz
Old sources:	PhysActBedRest archive

Linking:

Please use the canonical form https://CRAN.R-project.org/package=PhysActBedRest to link to this page.