grantham: Calculate the Grantham Distance
A minimal set of routines to calculate the Grantham distance
<doi:10.1126/science.185.4154.862>. The Grantham distance attempts to
provide a proxy for the evolutionary distance between two amino acids
based on three key chemical properties: composition, polarity and
molecular volume. In turn, evolutionary distance is used as a proxy for
the impact of missense mutations. The higher the distance, the more
deleterious the substitution is expected to be.
Version: |
0.1.2 |
Depends: |
R (≥ 2.10) |
Imports: |
tibble, vctrs, dplyr |
Suggests: |
spelling, testthat (≥ 3.0.0) |
Published: |
2024-07-30 |
DOI: |
10.32614/CRAN.package.grantham |
Author: |
Ramiro Magno
[aut, cre],
Isabel Duarte
[aut],
Ana-Teresa Maia
[aut],
University of Algarve [fnd],
CINTESIS [fnd],
Pattern Institute [cph, fnd] |
Maintainer: |
Ramiro Magno <rmagno at pattern.institute> |
BugReports: |
https://github.com/patterninstitute/grantham/issues |
License: |
MIT + file LICENSE |
URL: |
https://www.pattern.institute/grantham/,
https://github.com/patterninstitute/grantham |
NeedsCompilation: |
no |
Language: |
en-US |
Materials: |
README NEWS |
CRAN checks: |
grantham results |
Documentation:
Downloads:
Reverse dependencies:
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