rapidphylo: Rapidly Estimates Phylogeny from Large Allele Frequency Data Using Root Distances Method

Rapidly estimates tree-topology from large allele frequency data using Root Distances Method, under a Brownian Motion Model. See Peng et al. (2021) <doi:10.1016/j.ympev.2021.107142>.

Version: 0.1.2
Depends: R (≥ 4.1.0)
Imports: ape, phangorn, stats
Published: 2023-02-01
DOI: 10.32614/CRAN.package.rapidphylo
Author: Arindam RoyChoudhury [aut, cre, cph], Jing Peng [aut], Ying Li [aut], Laura Kubatko [aut, ths]
Maintainer: Arindam RoyChoudhury <arr2014 at med.cornell.edu>
BugReports: https://github.com/ArindamRoyChoudhury/rapidphylo/issues
License: AGPL-3
URL: https://github.com/ArindamRoyChoudhury/rapidphylo
NeedsCompilation: no
Materials: NEWS
CRAN checks: rapidphylo results

Documentation:

Reference manual: rapidphylo.pdf

Downloads:

Package source: rapidphylo_0.1.2.tar.gz
Windows binaries: r-devel: rapidphylo_0.1.2.zip, r-release: rapidphylo_0.1.2.zip, r-oldrel: rapidphylo_0.1.2.zip
macOS binaries: r-release (arm64): rapidphylo_0.1.2.tgz, r-oldrel (arm64): rapidphylo_0.1.2.tgz, r-release (x86_64): rapidphylo_0.1.2.tgz, r-oldrel (x86_64): rapidphylo_0.1.2.tgz
Old sources: rapidphylo archive

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