Calculate rarefaction-based alpha- and beta-diversity. Offer parametric extrapolation to estimate the total expected species in a single community and the total expected shared species between two communities. Visualize the curve-fitting for these estimators.
Version: | 1.1.0 |
Depends: | R (≥ 3.5.0) |
Imports: | Rdpack |
Suggests: | knitr, rmarkdown, testthat (≥ 3.0.0) |
Published: | 2024-09-26 |
DOI: | 10.32614/CRAN.package.rarestR |
Author: | Peng Zhao [aut, cre], Yi Zou [aut] |
Maintainer: | Peng Zhao <pengzhao20 at outlook.com> |
BugReports: | https://github.com/pzhaonet/rarestR/issues |
License: | MIT + file LICENSE |
URL: | https://github.com/pzhaonet/rarestR, https://pzhaonet.github.io/rarestr/ |
NeedsCompilation: | no |
Citation: | rarestR citation info |
CRAN checks: | rarestR results |
Reference manual: | rarestR.pdf |
Vignettes: |
rarestR: An R package using rarefaction metrics to estimate α-diversity and β-diversity for incomplete samples (source, R code) |
Package source: | rarestR_1.1.0.tar.gz |
Windows binaries: | r-devel: rarestR_1.1.0.zip, r-release: rarestR_1.1.0.zip, r-oldrel: rarestR_1.1.0.zip |
macOS binaries: | r-release (arm64): rarestR_1.1.0.tgz, r-oldrel (arm64): rarestR_1.1.0.tgz, r-release (x86_64): rarestR_1.1.0.tgz, r-oldrel (x86_64): rarestR_1.1.0.tgz |
Old sources: | rarestR archive |
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