A set of tools to reconstruct ordered ontogenic trajectories from single cell RNAseq data.
Version: | 1.0 |
Depends: | R (≥ 3.0) |
Imports: | animation (≥ 2.4), rARPACK (≥ 0.11-0), igraph (≥ 1.0.0) |
Suggests: | knitr, rmarkdown |
Published: | 2017-07-11 |
DOI: | 10.32614/CRAN.package.roots |
Author: | Wajid Jawaid [aut, cre] |
Maintainer: | Wajid Jawaid <wj241 at cam.ac.uk> |
License: | GPL-2 | GPL-3 [expanded from: GPL (≥ 2)] |
NeedsCompilation: | no |
Materials: | README |
CRAN checks: | roots results |
Reference manual: | roots.pdf |
Vignettes: |
Infer biologically plausible journeys through single cell data |
Package source: | roots_1.0.tar.gz |
Windows binaries: | r-devel: roots_1.0.zip, r-release: roots_1.0.zip, r-oldrel: roots_1.0.zip |
macOS binaries: | r-release (arm64): roots_1.0.tgz, r-oldrel (arm64): roots_1.0.tgz, r-release (x86_64): roots_1.0.tgz, r-oldrel (x86_64): roots_1.0.tgz |
Please use the canonical form https://CRAN.R-project.org/package=roots to link to this page.