Implements the algorithm described in Guo, H., and Li, J., "scSorter: assigning cells to known cell types according to known marker genes". Cluster cells to known cell types based on marker genes specified for each cell type.
Version: | 0.0.2 |
Depends: | R (≥ 3.6.0) |
Imports: | stats (≥ 3.6.0) |
Suggests: | knitr, rmarkdown |
Published: | 2021-03-17 |
DOI: | 10.32614/CRAN.package.scSorter |
Author: | Hongyu Guo [aut], Jun Li [aut, cre] |
Maintainer: | Jun Li <jun.li at nd.edu> |
License: | GPL-3 |
NeedsCompilation: | no |
In views: | Omics |
CRAN checks: | scSorter results |
Reference manual: | scSorter.pdf |
Vignettes: |
scSorter |
Package source: | scSorter_0.0.2.tar.gz |
Windows binaries: | r-devel: scSorter_0.0.2.zip, r-release: scSorter_0.0.2.zip, r-oldrel: scSorter_0.0.2.zip |
macOS binaries: | r-release (arm64): scSorter_0.0.2.tgz, r-oldrel (arm64): scSorter_0.0.2.tgz, r-release (x86_64): scSorter_0.0.2.tgz, r-oldrel (x86_64): scSorter_0.0.2.tgz |
Old sources: | scSorter archive |
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