Type: Package
Package: detrendr
Title: Detrend Images
Version: 0.6.15
Authors@R: c(
    person("Rory", "Nolan", , "rorynoolan@gmail.com", role = c("aut", "cre"),
           comment = c(ORCID = "0000-0002-5239-4043")),
    person("Luis", "Alvarez", , "lalvarez@well.ox.ac.uk", role = c("ctb", "cph"),
           comment = c(ORCID = "0000-0003-1316-1906")),
    person("Sergi", "Padilla-Parra", , "spadilla@well.ox.ac.uk", role = c("ctb", "ths", "cph"),
           comment = c(ORCID = "0000-0002-8010-9481"))
  )
Maintainer: Rory Nolan <rorynoolan@gmail.com>
Description: Detrend fluorescence microscopy image series for fluorescence
    fluctuation and correlation spectroscopy ('FCS' and 'FFS') analysis.
    This package contains functionality published in a 2016 paper
    <doi:10.1093/bioinformatics/btx434> but it has been extended since
    then with the Robin Hood algorithm and thus contains unpublished work.
License: BSD_3_clause + file LICENSE
URL: https://rorynolan.github.io/detrendr/,
        https://github.com/rorynolan/detrendr#readme
BugReports: https://github.com/rorynolan/detrendr/issues
Depends: R (>= 3.1)
Imports: arrayhelpers (>= 1.1.0), autothresholdr (>= 1.3.11), checkmate
        (>= 1.9.3), doParallel, dplyr, filesstrings (>= 3.2.4),
        foreach, ijtiff (>= 2.2), iterators, magrittr (>= 1.5),
        parallel, plyr, purrr, Rcpp (>= 1.0.10), RcppParallel (>=
        5.1.7), rlang (>= 0.3.3), stringr (>= 1.4), tools, withr (>=
        2.1)
Suggests: abind, covr, ggplot2, glue (>= 1.3.0), graphics, gridExtra,
        knitr, lattice, MASS, matrixStats, mgcv, pacman, R.utils,
        rmarkdown, spelling, testthat (>= 3.0), tidyr
LinkingTo: Rcpp (>= 1.0.10), RcppParallel (>= 5.1.7)
VignetteBuilder: knitr
Config/testthat/edition: 3
Config/testthat/parallel: true
Encoding: UTF-8
Language: en-US
RoxygenNote: 7.2.3
SystemRequirements: GNU make
NeedsCompilation: yes
Packaged: 2023-03-04 19:13:16 UTC; rnolan
Author: Rory Nolan [aut, cre] (<https://orcid.org/0000-0002-5239-4043>),
  Luis Alvarez [ctb, cph] (<https://orcid.org/0000-0003-1316-1906>),
  Sergi Padilla-Parra [ctb, ths, cph]
    (<https://orcid.org/0000-0002-8010-9481>)
Repository: CRAN
Date/Publication: 2023-03-04 21:20:02 UTC
Built: R 4.5.0; x86_64-apple-darwin20; 2025-01-20 00:48:37 UTC; unix
Archs: detrendr.so.dSYM
