cleanMCMCtrees | Run MCMC for Coalescent Trees |
coalescentMCMC | Run MCMC for Coalescent Trees |
dcoal | Density Functions of Various Time-Dependent Coalescent Models |
dcoal.linear | Density Functions of Various Time-Dependent Coalescent Models |
dcoal.step | Density Functions of Various Time-Dependent Coalescent Models |
dcoal.time | Density Functions of Various Time-Dependent Coalescent Models |
dcoal.time2 | Density Functions of Various Time-Dependent Coalescent Models |
EdgeLengthJittering | Trees Operators for Running MCMC |
getLastTree | Run MCMC for Coalescent Trees |
getMCMCstats | Run MCMC for Coalescent Trees |
getMCMCtrees | Run MCMC for Coalescent Trees |
NeighborhoodRearrangement | Trees Operators for Running MCMC |
saveMCMCtrees | Run MCMC for Coalescent Trees |
sim.coalescent | Coalescent Simulation and Visualisation |
TipInterchange | Trees Operators for Running MCMC |
treeOperators | Trees Operators for Running MCMC |