Surrogate Functional False Discovery Rates for Genome-Wide Association Studies


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Documentation for package ‘sffdr’ version 1.0.0

Help Pages

bmi Subset of p-values from the UK Biobank analysis
ffinemap Functional fine mapping
fpi0est Estimate the functional proportion of null tests
fpvalues Functional p-values
kernelEstimator Estimate a density on the unit interval or unit square via local regression
pi0_model Formulates the model for the proportion of null tests
plot, Plotting function for sffdr object
plot.sffdr Plotting function for sffdr object
sffdr Estimate the functional p-values, q-values, and local false discovery rates given a set of p-values and informative variables
sumstats Subset of p-values from the UK Biobank analysis