Parse Full Text XML Documents from PubMed Central


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Documentation for package ‘tidypmc’ version 2.0

Help Pages

collapse_rows Collapse a list of PubMed Central tables
extract_acronyms Find acronyms in parentheses
path_string Print a hierarchical path string
pmc_caption Split captions into sentences
pmc_metadata Get article metadata
pmc_reference Format references cited
pmc_table Convert table nodes to tibbles
pmc_text Split section paragraphs into sentences
pmc_xml Download XML from PubMed Central
repeat_sub Repeat table subheadings
separate_refs Separate references cited into multiple rows
separate_tags Separate locus tag into multiple rows
separate_text Separate all matching text into multiple rows