Fast Approximation of Time-Varying Infectious Disease Transmission Rates


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Documentation for package ‘fastbeta’ version 0.3.1

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fastbeta-package R Package 'fastbeta'
deconvolve Richardson-Lucy Deconvolution
fastbeta Estimate a Time-Varying Infectious Disease Transmission Rate
fastbeta.bootstrap Parametric Bootstrapping
fastbeta.matrix Calculate Coefficient Matrix for Iteration Step
ptpi Peak to Peak Iteration
seir Simulate Infectious Disease Time Series
seir.auxiliary Auxiliary Functions for the SEIR Model without Forcing
seir.ee Auxiliary Functions for the SEIR Model without Forcing
seir.jacobian Auxiliary Functions for the SEIR Model without Forcing
seir.library Often Used Simulations
seir.R0 Auxiliary Functions for the SEIR Model without Forcing
seir.ts01 Often Used Simulations
seir.ts02 Often Used Simulations
sir Simulate Infectious Disease Time Series
smallpox Smallpox Mortality in London, England, 1661-1930