agf |
Angiosperms Gymnosperms Ferns |
AngGym |
Angiosperms Gymnosperms |
A_selected |
Adjacency Matrix for Orthology Graph |
coltips |
Colouring Tree Tips |
gapless_msa |
Remove Gaps in a MSA |
getseqGS |
Get the GS Sequence |
madRoot |
Find The Root of a Phylogenetic Tree Using MAD Method |
mapTrees |
Map Gene Tree into Species Tree |
mltree |
Build Up a ML Tree |
msa |
Multiple Sequence Alignment |
orthG |
Infer GS OrthoGroups Within a Set of Species |
orthology |
Infer OrthoGroups Using Tree Reconciliation |
orthP |
Search Orthologous of a Given Protein |
sdf |
Seed Plants and Ferns GS |
selected_tr |
Ultrametric Rooted Seed Plants Tree |
speciesGS |
Map Species Names |
subsetGS |
GS Proteins Report |