Image Processing Tools for Barnes Maze Experiments


[Up] [Top]

Documentation for package ‘BioTrajectory’ version 1.0.0

Help Pages

detectBarnes Detect Circles in a Maze Image
distanceToTarget Calculates distances to a target point
distanceTraveled Calculates the total distance traveled through a series of points.
getRadius Estimate the Radius of a Circle Fitting Four Points
getTrajectory Get Object Trajectory from Image Sequence
heatmapFromPoints Creates a heatmap from a set of points.
interpolateTrajectory Interpolates a trajectory
nearestTarget Finds the nearest targets to a set of points within a specified radius.
readImage Read and Resize an Image
readtrackData Reads tracking data from a specified file.
selFrame Image Frame Selector and Viewer
showDistanceToTarget Visualizes the distance to the target in a plot.
showTrajectory Displays a trajectory plot from a set of coordinates.
videoToFrames Extract Frames from a Video and Save as Images