Package: TrialEmulation
Title: Causal Analysis of Observational Time-to-Event Data
Version: 0.0.4.0
Authors@R: c(
    person("Isaac", "Gravestock", , "isaac.gravestock@roche.com", role = c("aut", "cre"),
           comment = c(ORCID = "0000-0003-0283-2065")),
    person("Li", "Su", , "li.su@mrc-bsu.cam.ac.uk", role = "aut"),
    person("Roonak", "Rezvani", , "roonak.r74@gmail.com", role = "aut",
           comment = c(ORCID = "0000-0001-5580-5058", "Original package author")),
    person("Julia", "Moesch", , "julia.moesch@roche.com", role = "aut"),
    person("Medical Research Council (MRC)", role = "fnd"),
    person("F. Hoffmann-La Roche AG", role = c("cph", "fnd"))
  )
Description: Implements target trial emulation methods to apply randomized
    clinical trial design and analysis in an observational setting. Using
    marginal structural models, it can estimate intention-to-treat and
    per-protocol effects in emulated trials using electronic health
    records. A description and application of the method can be found in
    Danaei et al (2013) <doi:10.1177/0962280211403603>.
License: Apache License (>= 2)
URL: https://causal-lda.github.io/TrialEmulation/,
        https://github.com/Causal-LDA/TrialEmulation
BugReports: https://github.com/Causal-LDA/TrialEmulation/issues
Depends: R (>= 4.0.0)
Imports: broom (>= 0.7.10), checkmate, data.table (>= 1.9.8), DBI,
        duckdb, formula.tools, lifecycle, lmtest, methods, mvtnorm,
        parglm, Rcpp, sandwich
Suggests: knitr, parsnip, rmarkdown, rpart, testthat (>= 3.0.0), withr
LinkingTo: Rcpp
VignetteBuilder: knitr
Config/testthat/edition: 3
Encoding: UTF-8
Language: en-GB
LazyData: true
LazyDataCompression: xz
RoxygenNote: 7.3.2.9000
Collate: 'RcppExports.R' 'calculate_weights.R' 'data.R'
        'data_extension.R' 'data_manipulation.R' 'data_preparation.R'
        'data_simulation.R' 'data_utils.R' 'expand_trials.R'
        'generics.R' 'initiators.R' 'lr_utils.R' 'te_model_fitter.R'
        'te_outcome_model.R' 'te_datastore.R' 'te_weights.R'
        'te_data.R' 'te_expansion.R' 'trial_sequence.R' 'modelling.R'
        'package.R' 'predict.R' 'robust.R' 'sampling.R'
        'te_datastore_csv.R' 'te_datastore_duckdb.R' 'te_parsnip.R'
        'te_stats_glm_logit.R' 'utils.R' 'weighting.R'
NeedsCompilation: yes
Packaged: 2024-11-29 16:27:12 UTC; root
Author: Isaac Gravestock [aut, cre] (<https://orcid.org/0000-0003-0283-2065>),
  Li Su [aut],
  Roonak Rezvani [aut] (<https://orcid.org/0000-0001-5580-5058>, Original
    package author),
  Julia Moesch [aut],
  Medical Research Council (MRC) [fnd],
  F. Hoffmann-La Roche AG [cph, fnd]
Maintainer: Isaac Gravestock <isaac.gravestock@roche.com>
Repository: CRAN
Date/Publication: 2024-11-29 17:10:02 UTC
Built: R 4.4.2; x86_64-w64-mingw32; 2024-12-08 03:40:09 UTC; windows
Archs: x64
