alpha.bags |
Create alpha bags |
AoD |
Use the Analysis of Distance (AoD) method to construct the biplot |
AoD.biplot |
Calculate elements for the Analysis of Distance (AoD) biplot |
axes |
Format aesthetics for the biplot axes |
axes_coordinates |
Calibrate Biplot Axes |
biplot |
First step to create a new biplot with 'biplotEZ' |
biplotEZ |
biplotEZ: EZ-to-Use Biplots |
CA |
Correspondence Analysis (CA) method |
CA.biplot |
CA biplot |
CATPCA |
Categorical Principal Component Analysis |
classification |
Classification biplot method |
classification.biplot |
classification biplot |
classify |
Classify samples into classes |
CLPs |
Format aesthetics for the category level points |
CLRs |
Format aesthetics for the category level regions |
CVA |
Perform Canonical Variate Analysis (CVA) |
CVA.biplot |
Calculate elements for the CVA biplot |
CVAlowdim |
Construct additional dimensions when the dimension of the canonical space is smaller than the dimension of the biplot |
density1D |
Creates a kernel density in 1-dimension |
density2D |
Create a density in 2-dimensions |
ellipses |
Concentration ellipses (kappa-ellipses) |
extended.matching.coefficient |
Extended matching coefficient |
fit.measures |
Compute measures of fit for the biplot. |
interpolate |
Interpolate supplementary points and variables to add to the biplot |
legend.type |
Format the legend for the biplot |
means |
Format aesthetics for the class or group means |
newaxes |
Format aesthetics for the supplementary (new) biplot axes |
newsamples |
Format aesthetics for the supplementary (new) biplot samples |
PCA |
Perform Principal Components Analysis (PCA) |
PCA.biplot |
Calculate elements for the PCA biplot |
PCO |
Principal Coordinate Analysis (PCO) biplot method |
PCO.biplot |
PCO biplot |
plot.biplot |
Generic Plotting function of objects of class biplot |
prediction |
Predict samples to display on the biplot |
print.biplot |
Generic print function for objects of class biplot |
reflect |
Reflect the biplot about a chosen axis |
regress |
Regression biplot method |
regress.biplot |
Regression biplot |
rotate |
Rotate the biplot a chosen amount of degrees |
samples |
Format aesthetics for the biplot samples |
sqrtManhattan |
Computes the square root of the Manhattan distance An example of a Euclidean embeddable distance metric |
summary.biplot |
Generic summary function for objects of class biplot |
translate_axes |
Translate biplot axes |