Last updated on 2025-02-24 19:50:50 CET.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 0.1.6 | 7.46 | 117.97 | 125.43 | OK | |
| r-devel-linux-x86_64-debian-gcc | 0.1.6 | 3.80 | 83.83 | 87.63 | OK | |
| r-devel-linux-x86_64-fedora-clang | 0.1.6 | 104.35 | ERROR | |||
| r-devel-linux-x86_64-fedora-gcc | 0.1.6 | 119.34 | ERROR | |||
| r-devel-macos-arm64 | 0.1.6 | 79.00 | OK | |||
| r-devel-macos-x86_64 | 0.1.6 | 128.00 | OK | |||
| r-devel-windows-x86_64 | 0.1.6 | 8.00 | 245.00 | 253.00 | OK | |
| r-patched-linux-x86_64 | 0.1.6 | 6.82 | 108.42 | 115.24 | OK | |
| r-release-linux-x86_64 | 0.1.6 | 7.09 | 107.54 | 114.63 | OK | |
| r-release-macos-arm64 | 0.1.6 | 83.00 | OK | |||
| r-release-macos-x86_64 | 0.1.6 | 139.00 | OK | |||
| r-release-windows-x86_64 | 0.1.6 | 8.00 | 230.00 | 238.00 | OK | |
| r-oldrel-macos-arm64 | 0.1.6 | 182.00 | OK | |||
| r-oldrel-macos-x86_64 | 0.1.6 | 252.00 | OK | |||
| r-oldrel-windows-x86_64 | 0.1.6 | 11.00 | 265.00 | 276.00 | OK |
Version: 0.1.6
Check: tests
Result: ERROR
Running ‘testthat.R’
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> library(testthat)
> library(UKB.COVID19)
>
> test_check("UKB.COVID19")
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 0 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Error ('test_comorbidity_summary.R:5:3'): Generate comorbidity summary ──────
Error in `regexpr(as.character(pattern), text, ignore.case, perl, fixed,
useBytes)`: NA in coercion to Rboolean
Backtrace:
▆
1. └─UKB.COVID19::comorbidity_summary(...) at test_comorbidity_summary.R:5:3
2. └─data.table::fread(...)
3. ├─R.utils::decompressFile(...)
4. └─R.utils::decompressFile.default(...)
5. ├─R.utils::popTemporaryFile(destnameT)
6. └─R.utils::popTemporaryFile.default(destnameT)
7. └─base::regexpr(pattern, "", pathnameT)
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 0 ]
Error: Test failures
Execution halted
Flavor: r-devel-linux-x86_64-fedora-clang
Version: 0.1.6
Check: re-building of vignette outputs
Result: ERROR
Error(s) in re-building vignettes:
--- re-building ‘Introduction_to_UKB_COVID19.Rmd’ using rmarkdown
Quitting from lines 47-50 [unnamed-chunk-3] (Introduction_to_UKB_COVID19.Rmd)
Error: processing vignette 'Introduction_to_UKB_COVID19.Rmd' failed with diagnostics:
NA in coercion to Rboolean
--- failed re-building ‘Introduction_to_UKB_COVID19.Rmd’
SUMMARY: processing the following file failed:
‘Introduction_to_UKB_COVID19.Rmd’
Error: Vignette re-building failed.
Execution halted
Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc
Version: 0.1.6
Check: tests
Result: ERROR
Running ‘testthat.R’ [3s/14s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> library(testthat)
> library(UKB.COVID19)
>
> test_check("UKB.COVID19")
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 0 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Error ('test_comorbidity_summary.R:5:3'): Generate comorbidity summary ──────
Error in `regexpr(as.character(pattern), text, ignore.case, perl, fixed,
useBytes)`: NA in coercion to Rboolean
Backtrace:
▆
1. └─UKB.COVID19::comorbidity_summary(...) at test_comorbidity_summary.R:5:3
2. └─data.table::fread(...)
3. ├─R.utils::decompressFile(...)
4. └─R.utils::decompressFile.default(...)
5. ├─R.utils::popTemporaryFile(destnameT)
6. └─R.utils::popTemporaryFile.default(destnameT)
7. └─base::regexpr(pattern, "", pathnameT)
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 0 ]
Error: Test failures
Execution halted
Flavor: r-devel-linux-x86_64-fedora-gcc