CRAN Package Check Results for Maintainer ‘Berwin A. Turlach <Berwin.Turlach at gmail.com>’

Last updated on 2024-12-18 19:49:33 CET.

Package WARN NOTE OK
MonoPoly 13
quadprog 13
SimCop 3 10
Sleuth2 1 5 7
Sleuth3 1 5 7

Package MonoPoly

Current CRAN status: OK: 13

Package quadprog

Current CRAN status: OK: 13

Package SimCop

Current CRAN status: NOTE: 3, OK: 10

Version: 0.7.0
Check: Rd cross-references
Result: NOTE Found the following Rd file(s) with Rd \link{} targets missing package anchors: SplineFitDepFct.Rd: solve.QP Please provide package anchors for all Rd \link{} targets not in the package itself and the base packages. Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-windows-x86_64

Package Sleuth2

Current CRAN status: WARN: 1, NOTE: 5, OK: 7

Version: 2.0-7
Check: installed package size
Result: NOTE installed size is 5.1Mb sub-directories of 1Mb or more: doc 4.4Mb Flavors: r-release-macos-arm64, r-release-macos-x86_64, r-release-windows-x86_64, r-oldrel-macos-arm64, r-oldrel-macos-x86_64, r-oldrel-windows-x86_64

Version: 2.0-7
Check: re-building of vignette outputs
Result: WARN Error(s) in re-building vignettes: --- re-building ‘chapter01-HortonMosaic.Rnw’ using knitr Error: processing vignette 'chapter01-HortonMosaic.Rnw' failed with diagnostics: Running 'texi2dvi' on 'chapter01-HortonMosaic.tex' failed. LaTeX errors: ! Undefined control sequence. l.174 \hldef {> }\hlkwd{install.packages}\hldef{(}\hlsng{'mosaic'}\hldef{)} ... ? ! Emergency stop. l.174 End of file on the terminal! ! ==> Fatal error occurred, no output PDF file produced! --- failed re-building ‘chapter01-HortonMosaic.Rnw’ --- re-building ‘chapter02-HortonMosaic.Rnw’ using knitr Error: processing vignette 'chapter02-HortonMosaic.Rnw' failed with diagnostics: Running 'texi2dvi' on 'chapter02-HortonMosaic.tex' failed. LaTeX errors: ! Undefined control sequence. l.175 \hldef {> }\hlkwd{install.packages}\hldef{(}\hlsng{'mosaic'}\hldef{)} ... ? ! Emergency stop. l.175 End of file on the terminal! ! ==> Fatal error occurred, no output PDF file produced! --- failed re-building ‘chapter02-HortonMosaic.Rnw’ --- re-building ‘chapter03-HortonMosaic.Rnw’ using knitr Error: processing vignette 'chapter03-HortonMosaic.Rnw' failed with diagnostics: Running 'texi2dvi' on 'chapter03-HortonMosaic.tex' failed. LaTeX errors: ! Undefined control sequence. l.175 \hldef {> }\hlkwd{install.packages}\hldef{(}\hlsng{'mosaic'}\hldef{)} ... ? ! Emergency stop. l.175 End of file on the terminal! ! ==> Fatal error occurred, no output PDF file produced! --- failed re-building ‘chapter03-HortonMosaic.Rnw’ --- re-building ‘chapter04-HortonMosaic.Rnw’ using knitr Warning in wilcox.test.default(x = DATA[[1L]], y = DATA[[2L]], ...) : cannot compute exact p-value with ties Warning in wilcox.test.default(x = DATA[[1L]], y = DATA[[2L]], ...) : cannot compute exact confidence intervals with ties Warning in wilcox.test.default(x = DATA[[1L]], y = DATA[[2L]], ...) : cannot compute exact p-value with ties Warning in wilcox.test.default(x = DATA[[1L]], y = DATA[[2L]], ...) : cannot compute exact confidence intervals with ties Warning in wilcox.test.default(x = DATA[[1L]], y = DATA[[2L]], ...) : cannot compute exact p-value with ties Warning in wilcox.test.default(x = DATA[[1L]], y = DATA[[2L]], ...) : cannot compute exact confidence intervals with ties Error: processing vignette 'chapter04-HortonMosaic.Rnw' failed with diagnostics: Running 'texi2dvi' on 'chapter04-HortonMosaic.tex' failed. LaTeX errors: ! Undefined control sequence. l.175 \hldef {> }\hlkwd{install.packages}\hldef{(}\hlsng{'mosaic'}\hldef{)} ... ? ! Emergency stop. l.175 End of file on the terminal! ! ==> Fatal error occurred, no output PDF file produced! --- failed re-building ‘chapter04-HortonMosaic.Rnw’ --- re-building ‘chapter05-HortonMosaic.Rnw’ using knitr Error: processing vignette 'chapter05-HortonMosaic.Rnw' failed with diagnostics: Running 'texi2dvi' on 'chapter05-HortonMosaic.tex' failed. LaTeX errors: ! Undefined control sequence. l.175 \hldef {> }\hlkwd{install.packages}\hldef{(}\hlsng{'mosaic'}\hldef{)} ... ? ! Emergency stop. l.175 End of file on the terminal! ! ==> Fatal error occurred, no output PDF file produced! --- failed re-building ‘chapter05-HortonMosaic.Rnw’ --- re-building ‘chapter06-HortonMosaic.Rnw’ using knitr Error: processing vignette 'chapter06-HortonMosaic.Rnw' failed with diagnostics: Running 'texi2dvi' on 'chapter06-HortonMosaic.tex' failed. LaTeX errors: ! Undefined control sequence. l.174 \hldef {> }\hlkwd{install.packages}\hldef{(}\hlsng{'mosaic'}\hldef{)} ... ? ! Emergency stop. l.174 End of file on the terminal! ! ==> Fatal error occurred, no output PDF file produced! --- failed re-building ‘chapter06-HortonMosaic.Rnw’ --- re-building ‘chapter07-HortonMosaic.Rnw’ using knitr Error: processing vignette 'chapter07-HortonMosaic.Rnw' failed with diagnostics: Running 'texi2dvi' on 'chapter07-HortonMosaic.tex' failed. LaTeX errors: ! Undefined control sequence. l.175 \hldef {> }\hlkwd{install.packages}\hldef{(}\hlsng{'mosaic'}\hldef{)} ... ? ! Emergency stop. l.175 End of file on the terminal! ! ==> Fatal error occurred, no output PDF file produced! --- failed re-building ‘chapter07-HortonMosaic.Rnw’ --- re-building ‘chapter08-HortonMosaic.Rnw’ using knitr Error: processing vignette 'chapter08-HortonMosaic.Rnw' failed with diagnostics: Running 'texi2dvi' on 'chapter08-HortonMosaic.tex' failed. LaTeX errors: ! Undefined control sequence. l.176 \hldef {> }\hlkwd{install.packages}\hldef{(}\hlsng{'mosaic'}\hldef{)} ... ? ! Emergency stop. l.176 End of file on the terminal! ! ==> Fatal error occurred, no output PDF file produced! --- failed re-building ‘chapter08-HortonMosaic.Rnw’ --- re-building ‘chapter09-HortonMosaic.Rnw’ using knitr Error: processing vignette 'chapter09-HortonMosaic.Rnw' failed with diagnostics: Running 'texi2dvi' on 'chapter09-HortonMosaic.tex' failed. LaTeX errors: ! Undefined control sequence. l.176 \hldef {> }\hlkwd{install.packages}\hldef{(}\hlsng{'mosaic'}\hldef{)} ... ? ! Emergency stop. l.176 End of file on the terminal! ! ==> Fatal error occurred, no output PDF file produced! --- failed re-building ‘chapter09-HortonMosaic.Rnw’ --- re-building ‘chapter10-HortonMosaic.Rnw’ using knitr Error: processing vignette 'chapter10-HortonMosaic.Rnw' failed with diagnostics: Running 'texi2dvi' on 'chapter10-HortonMosaic.tex' failed. LaTeX errors: ! Undefined control sequence. l.176 \hldef {> }\hlkwd{install.packages}\hldef{(}\hlsng{'mosaic'}\hldef{)} ... ? ! Emergency stop. l.176 End of file on the terminal! ! ==> Fatal error occurred, no output PDF file produced! --- failed re-building ‘chapter10-HortonMosaic.Rnw’ --- re-building ‘chapter11-HortonMosaic.Rnw’ using knitr Error: processing vignette 'chapter11-HortonMosaic.Rnw' failed with diagnostics: Running 'texi2dvi' on 'chapter11-HortonMosaic.tex' failed. LaTeX errors: ! Undefined control sequence. l.176 \hldef {> }\hlkwd{install.packages}\hldef{(}\hlsng{'mosaic'}\hldef{)} ... ? ! Emergency stop. l.176 End of file on the terminal! ! ==> Fatal error occurred, no output PDF file produced! --- failed re-building ‘chapter11-HortonMosaic.Rnw’ --- re-building ‘chapter12-HortonMosaic.Rnw’ using knitr Error: processing vignette 'chapter12-HortonMosaic.Rnw' failed with diagnostics: Running 'texi2dvi' on 'chapter12-HortonMosaic.tex' failed. LaTeX errors: ! Undefined control sequence. l.172 \hldef {> }\hlkwd{install.packages}\hldef{(}\hlsng{'mosaic'}\hldef{)} ... ? ! Emergency stop. l.172 End of file on the terminal! ! ==> Fatal error occurred, no output PDF file produced! --- failed re-building ‘chapter12-HortonMosaic.Rnw’ --- re-building ‘chapter13-HortonMosaic.Rnw’ using knitr Error: processing vignette 'chapter13-HortonMosaic.Rnw' failed with diagnostics: Running 'texi2dvi' on 'chapter13-HortonMosaic.tex' failed. LaTeX errors: ! Undefined control sequence. l.176 \hldef {> }\hlkwd{install.packages}\hldef{(}\hlsng{'mosaic'}\hldef{)} ... ? ! Emergency stop. l.176 End of file on the terminal! ! ==> Fatal error occurred, no output PDF file produced! --- failed re-building ‘chapter13-HortonMosaic.Rnw’ SUMMARY: processing the following files failed: ‘chapter01-HortonMosaic.Rnw’ ‘chapter02-HortonMosaic.Rnw’ ‘chapter03-HortonMosaic.Rnw’ ‘chapter04-HortonMosaic.Rnw’ ‘chapter05-HortonMosaic.Rnw’ ‘chapter06-HortonMosaic.Rnw’ ‘chapter07-HortonMosaic.Rnw’ ‘chapter08-HortonMosaic.Rnw’ ‘chapter09-HortonMosaic.Rnw’ ‘chapter10-HortonMosaic.Rnw’ ‘chapter11-HortonMosaic.Rnw’ ‘chapter12-HortonMosaic.Rnw’ ‘chapter13-HortonMosaic.Rnw’ Error: Vignette re-building failed. Execution halted Flavor: r-release-macos-x86_64

Package Sleuth3

Current CRAN status: WARN: 1, NOTE: 5, OK: 7

Version: 1.0-6
Check: installed package size
Result: NOTE installed size is 5.9Mb sub-directories of 1Mb or more: doc 4.5Mb Flavors: r-release-macos-arm64, r-release-macos-x86_64, r-release-windows-x86_64, r-oldrel-macos-arm64, r-oldrel-macos-x86_64, r-oldrel-windows-x86_64

Version: 1.0-6
Check: re-building of vignette outputs
Result: WARN Error(s) in re-building vignettes: --- re-building ‘chapter01-HortonMosaic.Rnw’ using knitr Error: processing vignette 'chapter01-HortonMosaic.Rnw' failed with diagnostics: Running 'texi2dvi' on 'chapter01-HortonMosaic.tex' failed. LaTeX errors: ! Undefined control sequence. l.174 \hldef {> }\hlkwd{install.packages}\hldef{(}\hlsng{'mosaic'}\hldef{)} ... ? ! Emergency stop. l.174 End of file on the terminal! ! ==> Fatal error occurred, no output PDF file produced! --- failed re-building ‘chapter01-HortonMosaic.Rnw’ --- re-building ‘chapter02-HortonMosaic.Rnw’ using knitr Error: processing vignette 'chapter02-HortonMosaic.Rnw' failed with diagnostics: Running 'texi2dvi' on 'chapter02-HortonMosaic.tex' failed. LaTeX errors: ! Undefined control sequence. l.177 \hldef {> }\hlkwd{install.packages}\hldef{(}\hlsng{'mosaic'}\hldef{)} ... ? ! Emergency stop. l.177 End of file on the terminal! ! ==> Fatal error occurred, no output PDF file produced! --- failed re-building ‘chapter02-HortonMosaic.Rnw’ --- re-building ‘chapter03-HortonMosaic.Rnw’ using knitr Error: processing vignette 'chapter03-HortonMosaic.Rnw' failed with diagnostics: Running 'texi2dvi' on 'chapter03-HortonMosaic.tex' failed. LaTeX errors: ! Undefined control sequence. l.177 \hldef {> }\hlkwd{install.packages}\hldef{(}\hlsng{'mosaic'}\hldef{)} ... ? ! Emergency stop. l.177 End of file on the terminal! ! ==> Fatal error occurred, no output PDF file produced! --- failed re-building ‘chapter03-HortonMosaic.Rnw’ --- re-building ‘chapter04-HortonMosaic.Rnw’ using knitr Warning in wilcox.test.default(x = DATA[[1L]], y = DATA[[2L]], ...) : cannot compute exact p-value with ties Warning in wilcox.test.default(x = DATA[[1L]], y = DATA[[2L]], ...) : cannot compute exact confidence intervals with ties Warning in wilcox.test.default(x = DATA[[1L]], y = DATA[[2L]], ...) : cannot compute exact p-value with ties Warning in wilcox.test.default(x = DATA[[1L]], y = DATA[[2L]], ...) : cannot compute exact confidence intervals with ties Warning in wilcox.test.default(x = DATA[[1L]], y = DATA[[2L]], ...) : cannot compute exact p-value with ties Warning in wilcox.test.default(x = DATA[[1L]], y = DATA[[2L]], ...) : cannot compute exact confidence intervals with ties Error: processing vignette 'chapter04-HortonMosaic.Rnw' failed with diagnostics: Running 'texi2dvi' on 'chapter04-HortonMosaic.tex' failed. LaTeX errors: ! Undefined control sequence. l.177 \hldef {> }\hlkwd{install.packages}\hldef{(}\hlsng{'mosaic'}\hldef{)} ... ? ! Emergency stop. l.177 End of file on the terminal! ! ==> Fatal error occurred, no output PDF file produced! --- failed re-building ‘chapter04-HortonMosaic.Rnw’ --- re-building ‘chapter05-HortonMosaic.Rnw’ using knitr Error: processing vignette 'chapter05-HortonMosaic.Rnw' failed with diagnostics: Running 'texi2dvi' on 'chapter05-HortonMosaic.tex' failed. LaTeX errors: ! Undefined control sequence. l.177 \hldef {> }\hlkwd{install.packages}\hldef{(}\hlsng{'mosaic'}\hldef{)} ... ? ! Emergency stop. l.177 End of file on the terminal! ! ==> Fatal error occurred, no output PDF file produced! --- failed re-building ‘chapter05-HortonMosaic.Rnw’ --- re-building ‘chapter06-HortonMosaic.Rnw’ using knitr Error: processing vignette 'chapter06-HortonMosaic.Rnw' failed with diagnostics: Running 'texi2dvi' on 'chapter06-HortonMosaic.tex' failed. LaTeX errors: ! Undefined control sequence. l.176 \hldef {> }\hlkwd{install.packages}\hldef{(}\hlsng{'mosaic'}\hldef{)} ... ? ! Emergency stop. l.176 End of file on the terminal! ! ==> Fatal error occurred, no output PDF file produced! --- failed re-building ‘chapter06-HortonMosaic.Rnw’ --- re-building ‘chapter07-HortonMosaic.Rnw’ using knitr Error: processing vignette 'chapter07-HortonMosaic.Rnw' failed with diagnostics: Running 'texi2dvi' on 'chapter07-HortonMosaic.tex' failed. LaTeX errors: ! Undefined control sequence. l.174 \hldef {> }\hlkwd{install.packages}\hldef{(}\hlsng{'mosaic'}\hldef{)} ... ? ! Emergency stop. l.174 End of file on the terminal! ! ==> Fatal error occurred, no output PDF file produced! --- failed re-building ‘chapter07-HortonMosaic.Rnw’ --- re-building ‘chapter08-HortonMosaic.Rnw’ using knitr Error: processing vignette 'chapter08-HortonMosaic.Rnw' failed with diagnostics: Running 'texi2dvi' on 'chapter08-HortonMosaic.tex' failed. LaTeX errors: ! Undefined control sequence. l.177 \hldef {> }\hlkwd{install.packages}\hldef{(}\hlsng{'mosaic'}\hldef{)} ... ? ! Emergency stop. l.177 End of file on the terminal! ! ==> Fatal error occurred, no output PDF file produced! --- failed re-building ‘chapter08-HortonMosaic.Rnw’ --- re-building ‘chapter09-HortonMosaic.Rnw’ using knitr Error: processing vignette 'chapter09-HortonMosaic.Rnw' failed with diagnostics: Running 'texi2dvi' on 'chapter09-HortonMosaic.tex' failed. LaTeX errors: ! Undefined control sequence. l.177 \hldef {> }\hlkwd{install.packages}\hldef{(}\hlsng{'mosaic'}\hldef{)} ... ? ! Emergency stop. l.177 End of file on the terminal! ! ==> Fatal error occurred, no output PDF file produced! --- failed re-building ‘chapter09-HortonMosaic.Rnw’ --- re-building ‘chapter10-HortonMosaic.Rnw’ using knitr Error: processing vignette 'chapter10-HortonMosaic.Rnw' failed with diagnostics: Running 'texi2dvi' on 'chapter10-HortonMosaic.tex' failed. LaTeX errors: ! Undefined control sequence. l.177 \hldef {> }\hlkwd{install.packages}\hldef{(}\hlsng{'mosaic'}\hldef{)} ... ? ! Emergency stop. l.177 End of file on the terminal! ! ==> Fatal error occurred, no output PDF file produced! --- failed re-building ‘chapter10-HortonMosaic.Rnw’ --- re-building ‘chapter11-HortonMosaic.Rnw’ using knitr Error: processing vignette 'chapter11-HortonMosaic.Rnw' failed with diagnostics: Running 'texi2dvi' on 'chapter11-HortonMosaic.tex' failed. LaTeX errors: ! Undefined control sequence. l.177 \hldef {> }\hlkwd{install.packages}\hldef{(}\hlsng{'mosaic'}\hldef{)} ... ? ! Emergency stop. l.177 End of file on the terminal! ! ==> Fatal error occurred, no output PDF file produced! --- failed re-building ‘chapter11-HortonMosaic.Rnw’ --- re-building ‘chapter12-HortonMosaic.Rnw’ using knitr Error: processing vignette 'chapter12-HortonMosaic.Rnw' failed with diagnostics: Running 'texi2dvi' on 'chapter12-HortonMosaic.tex' failed. LaTeX errors: ! Undefined control sequence. l.172 \hldef {> }\hlkwd{install.packages}\hldef{(}\hlsng{'mosaic'}\hldef{)} ... ? ! Emergency stop. l.172 End of file on the terminal! ! ==> Fatal error occurred, no output PDF file produced! --- failed re-building ‘chapter12-HortonMosaic.Rnw’ --- re-building ‘chapter13-HortonMosaic.Rnw’ using knitr Error: processing vignette 'chapter13-HortonMosaic.Rnw' failed with diagnostics: Running 'texi2dvi' on 'chapter13-HortonMosaic.tex' failed. LaTeX errors: ! Undefined control sequence. l.177 \hldef {> }\hlkwd{install.packages}\hldef{(}\hlsng{'mosaic'}\hldef{)} ... ? ! Emergency stop. l.177 End of file on the terminal! ! ==> Fatal error occurred, no output PDF file produced! --- failed re-building ‘chapter13-HortonMosaic.Rnw’ SUMMARY: processing the following files failed: ‘chapter01-HortonMosaic.Rnw’ ‘chapter02-HortonMosaic.Rnw’ ‘chapter03-HortonMosaic.Rnw’ ‘chapter04-HortonMosaic.Rnw’ ‘chapter05-HortonMosaic.Rnw’ ‘chapter06-HortonMosaic.Rnw’ ‘chapter07-HortonMosaic.Rnw’ ‘chapter08-HortonMosaic.Rnw’ ‘chapter09-HortonMosaic.Rnw’ ‘chapter10-HortonMosaic.Rnw’ ‘chapter11-HortonMosaic.Rnw’ ‘chapter12-HortonMosaic.Rnw’ ‘chapter13-HortonMosaic.Rnw’ Error: Vignette re-building failed. Execution halted Flavor: r-release-macos-x86_64