CRAN Package Check Results for Maintainer ‘Paul M. Hargarten <hargartenp at alumni.vcu.edu>’

Last updated on 2025-03-10 18:53:12 CET.

Package ERROR NOTE OK
matrixNormal 1 14
miWQS 5 2 8

Package matrixNormal

Current CRAN status: NOTE: 1, OK: 14

Version: 0.1.1
Check: package dependencies
Result: NOTE Package suggested but not available for checking: ‘MBSP’ Flavor: r-oldrel-macos-x86_64

Package miWQS

Current CRAN status: ERROR: 5, NOTE: 2, OK: 8

Version: 0.4.4
Check: Rd cross-references
Result: NOTE Found the following Rd file(s) with Rd \link{} targets missing package anchors: coef.wqs.Rd: glm2 estimate.wqs.Rd: glm2 Please provide package anchors for all Rd \link{} targets not in the package itself and the base packages. Unknown package ‘wqs’ in Rd xrefs Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc

Version: 0.4.4
Check: examples
Result: ERROR Running examples in ‘miWQS-Ex.R’ failed The error most likely occurred in: > base::assign(".ptime", proc.time(), pos = "CheckExEnv") > ### Name: estimate.wqs > ### Title: Weighted Quantile Sum (WQS) Regression > ### Aliases: estimate.wqs > ### Keywords: imputation wqs > > ### ** Examples > > # Example 1: Binary outcome using the example simulated dataset in this package. > data(simdata87) > set.seed(23456) > W.bin4 <- estimate.wqs( + y = simdata87$y.scenario, X = simdata87$X.true[, 1:9], + B = 10, family = "binomial", + verbose = TRUE + ) ## Outcome Summary Min. 1st Qu. Median Mean 3rd Qu. Max. 0.000 0.000 0.000 0.457 1.000 1.000 ## Classes: y X Z "integer" "data.frame" "NULL" X alpha.chlordane dieldrin gamma.chlordane lindane Min. :0.000e+00 Min. : 0.111 Min. : 13.51 Min. : 3.513 1st Qu.:1.110e+01 1st Qu.: 14.344 1st Qu.: 36.68 1st Qu.:11.163 Median :1.254e+02 Median : 52.536 Median : 46.35 Median :14.981 Mean :4.410e+04 Mean : 433.116 Mean : 49.35 Mean :17.174 3rd Qu.:1.682e+03 3rd Qu.: 218.957 3rd Qu.: 58.91 3rd Qu.:21.129 Max. :1.735e+07 Max. :48673.296 Max. :139.34 Max. :75.360 methoxychlor dde ddt pentachlorophenol Min. : 17.30 Min. : 0.02 Min. : 1.382 Min. : 1.615 1st Qu.: 55.83 1st Qu.: 13.69 1st Qu.: 7.307 1st Qu.: 8.390 Median : 75.17 Median : 84.22 Median : 12.290 Median : 14.651 Mean : 83.29 Mean : 2546.60 Mean : 16.119 Mean : 20.251 3rd Qu.:101.89 3rd Qu.: 529.84 3rd Qu.: 19.398 3rd Qu.: 23.942 Max. :316.07 Max. :383567.39 Max. :178.854 Max. :285.229 pcb_105 Min. : 0.109 1st Qu.: 3.317 Median : 7.458 Mean : 16.473 3rd Qu.: 17.779 Max. :400.360 y Min. 1st Qu. Median Mean 3rd Qu. Max. 0.000 0.000 0.000 0.457 1.000 1.000 Z Length Class Mode 0 NULL NULL ## Place BDLs in Q1? FALSE #> No missing values in matrix detected. Regular quantiles computed. Error in sort.int(x, na.last = na.last, decreasing = decreasing, ...) : 'partial' index 1001 outside bounds Calls: estimate.wqs ... quantile.default -> sort -> sort.default -> sort.int Execution halted Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc

Version: 0.4.4
Check: Rd cross-references
Result: NOTE Unknown package ‘wqs’ in Rd xrefs Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-patched-linux-x86_64, r-release-linux-x86_64

Version: 0.4.4
Check: examples
Result: ERROR Running examples in ‘miWQS-Ex.R’ failed The error most likely occurred in: > ### Name: estimate.wqs > ### Title: Weighted Quantile Sum (WQS) Regression > ### Aliases: estimate.wqs > ### Keywords: imputation wqs > > ### ** Examples > > # Example 1: Binary outcome using the example simulated dataset in this package. > data(simdata87) > set.seed(23456) > W.bin4 <- estimate.wqs( + y = simdata87$y.scenario, X = simdata87$X.true[, 1:9], + B = 10, family = "binomial", + verbose = TRUE + ) ## Outcome Summary Min. 1st Qu. Median Mean 3rd Qu. Max. 0.000 0.000 0.000 0.457 1.000 1.000 ## Classes: y X Z "integer" "data.frame" "NULL" X alpha.chlordane dieldrin gamma.chlordane lindane Min. :0.000e+00 Min. : 0.111 Min. : 13.51 Min. : 3.513 1st Qu.:1.110e+01 1st Qu.: 14.344 1st Qu.: 36.68 1st Qu.:11.163 Median :1.254e+02 Median : 52.536 Median : 46.35 Median :14.981 Mean :4.410e+04 Mean : 433.116 Mean : 49.35 Mean :17.174 3rd Qu.:1.682e+03 3rd Qu.: 218.957 3rd Qu.: 58.91 3rd Qu.:21.129 Max. :1.735e+07 Max. :48673.296 Max. :139.34 Max. :75.360 methoxychlor dde ddt pentachlorophenol Min. : 17.30 Min. : 0.02 Min. : 1.382 Min. : 1.615 1st Qu.: 55.83 1st Qu.: 13.69 1st Qu.: 7.307 1st Qu.: 8.390 Median : 75.17 Median : 84.22 Median : 12.290 Median : 14.651 Mean : 83.29 Mean : 2546.60 Mean : 16.119 Mean : 20.251 3rd Qu.:101.89 3rd Qu.: 529.84 3rd Qu.: 19.398 3rd Qu.: 23.942 Max. :316.07 Max. :383567.39 Max. :178.854 Max. :285.229 pcb_105 Min. : 0.109 1st Qu.: 3.317 Median : 7.458 Mean : 16.473 3rd Qu.: 17.779 Max. :400.360 y Min. 1st Qu. Median Mean 3rd Qu. Max. 0.000 0.000 0.000 0.457 1.000 1.000 Z Length Class Mode 0 NULL NULL ## Place BDLs in Q1? FALSE #> No missing values in matrix detected. Regular quantiles computed. Error in sort.int(x, na.last = na.last, decreasing = decreasing, ...) : 'partial' index 1001 outside bounds Calls: estimate.wqs ... quantile.default -> sort -> sort.default -> sort.int Execution halted Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-x86_64

Version: 0.4.4
Check: for detritus in the temp directory
Result: NOTE Found the following files/directories: ‘par-7269706c6579’ Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc

Version: 0.4.4
Check: Rd cross-references
Result: NOTE Found the following Rd file(s) with Rd \link{} targets missing package anchors: coef.wqs.Rd: glm2 estimate.wqs.Rd: glm2 Please provide package anchors for all Rd \link{} targets not in the package itself and the base packages. Flavor: r-devel-windows-x86_64

Version: 0.4.4
Check: package dependencies
Result: NOTE Package suggested but not available for checking: ‘wqs’ Flavors: r-patched-linux-x86_64, r-release-linux-x86_64