Last updated on 2024-12-18 19:49:39 CET.
| Package | ERROR | NOTE | OK |
|---|---|---|---|
| bmp | 13 | ||
| colorRamps | 13 | ||
| dendroextras | 13 | ||
| dracor | 4 | 9 | |
| IgorR | 5 | 8 | |
| nabor | 4 | 9 | |
| nat | 5 | 8 | |
| nat.nblast | 1 | 4 | 8 |
| nat.templatebrains | 3 | 10 | |
| nat.utils | 13 | ||
| natcpp | 13 | ||
| natmanager | 1 | 2 | 10 |
| RANN | 13 | ||
| readbitmap | 13 | ||
| readobj | 13 |
Current CRAN status: OK: 13
Current CRAN status: OK: 13
Current CRAN status: OK: 13
Current CRAN status: NOTE: 4, OK: 9
Version: 0.2.6
Check: installed package size
Result: NOTE
installed size is 12.4Mb
sub-directories of 1Mb or more:
libs 12.2Mb
Flavors: r-release-macos-arm64, r-release-macos-x86_64, r-oldrel-macos-arm64, r-oldrel-macos-x86_64
Current CRAN status: NOTE: 5, OK: 8
Version: 0.9.0
Check: R code for possible problems
Result: NOTE
Found the following assignments to the global environment:
File ‘IgorR/R/ReadIgorBinary.R’:
assign(WaveName, rval, envir = .GlobalEnv)
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-patched-linux-x86_64, r-release-linux-x86_64
Current CRAN status: NOTE: 4, OK: 9
Version: 0.5.0
Check: installed package size
Result: NOTE
installed size is 8.8Mb
sub-directories of 1Mb or more:
libs 8.7Mb
Flavors: r-release-macos-arm64, r-release-macos-x86_64, r-oldrel-macos-arm64, r-oldrel-macos-x86_64
Current CRAN status: NOTE: 5, OK: 8
Version: 1.8.24
Check: Rd cross-references
Result: NOTE
Found the following Rd file(s) with Rd \link{} targets missing package
anchors:
as.mesh3d.Rd: rgl
boundingbox.Rd: mesh3d
cmtk.reformatx.Rd: RunCmdForNewerInput, makelock
find.neuron.Rd: select3d
find.soma.Rd: select3d
nat-package.Rd: igraph, select3d, rgl
ndigest.Rd: digest
neuron.Rd: dfs
ngraph.Rd: igraph
nopen3d.Rd: open3d
nview3d.Rd: view3d
pan3d.Rd: rgl.setMouseCallbacks
seglist.Rd: igraph
Please provide package anchors for all Rd \link{} targets not in the
package itself and the base packages.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-windows-x86_64
Version: 1.8.24
Check: for detritus in the temp directory
Result: NOTE
Found the following files/directories:
‘Crashpad’
Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc
Current CRAN status: ERROR: 1, NOTE: 4, OK: 8
Version: 1.6.7
Check: Rd cross-references
Result: NOTE
Found the following Rd file(s) with Rd \link{} targets missing package
anchors:
WeightedNNBasedLinesetMatching.Rd: dotprops, neuron
nat.nblast-package.Rd: neuronlist, neuronlistfh
nblast.Rd: nat-package, plyr
nblast_allbyall.Rd: neuronlist
neuron_pairs.Rd: neuronlist
plot3d.hclust.Rd: slice, colour_clusters
Please provide package anchors for all Rd \link{} targets not in the
package itself and the base packages.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-windows-x86_64
Version: 1.6.7
Check: for detritus in the temp directory
Result: NOTE
Found the following files/directories:
‘Crashpad’
Flavor: r-devel-linux-x86_64-fedora-gcc
Version: 1.6.7
Check: re-building of vignette outputs
Result: ERROR
Error(s) in re-building vignettes:
...
--- re-building ‘NBLAST-Clustering.Rmd’ using rmarkdown
Pandoc is required to build R Markdown vignettes but not available. Please make sure it is installed.
2023-07-10 21:31:32.757 R[43986:2287591920] XType: Using static font registry.
Quitting from lines 57-60 [unnamed-chunk-5] (NBLAST-Clustering.Rmd)
Error: processing vignette 'NBLAST-Clustering.Rmd' failed with diagnostics:
Saving a widget with selfcontained = TRUE requires pandoc. See here to learn more https://bookdown.org/yihui/rmarkdown-cookbook/install-pandoc.html
--- failed re-building ‘NBLAST-Clustering.Rmd’
SUMMARY: processing the following file failed:
‘NBLAST-Clustering.Rmd’
Error: Vignette re-building failed.
Execution halted
Flavor: r-oldrel-macos-x86_64
Current CRAN status: NOTE: 3, OK: 10
Version: 1.1
Check: Rd cross-references
Result: NOTE
Found the following Rd file(s) with Rd \link{} targets missing package
anchors:
fit_xform.Rd: xform, xyzmatrix, computeTransform
fit_xform_brain.Rd: computeTransform
guess_templatebrain.Rd: im3d
local_reg_dir_for_url.Rd: user_data_dir
xform_brain.Rd: cmtk.reformatx, xform, xformpoints, xformimage
Please provide package anchors for all Rd \link{} targets not in the
package itself and the base packages.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-windows-x86_64
Current CRAN status: OK: 13
Current CRAN status: OK: 13
Current CRAN status: ERROR: 1, NOTE: 2, OK: 10
Version: 0.5.1
Check: package dependencies
Result: ERROR
Package required but not available: ‘pak’
See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’
manual.
Flavor: r-devel-linux-x86_64-debian-clang
Version: 0.5.1
Check: Rd cross-references
Result: NOTE
Found the following Rd file(s) with Rd \link{} targets missing package
anchors:
install.Rd: pak
selfupdate.Rd: pak
Please provide package anchors for all Rd \link{} targets not in the
package itself and the base packages.
Flavors: r-devel-linux-x86_64-debian-gcc, r-devel-windows-x86_64
Current CRAN status: OK: 13
Current CRAN status: OK: 13
Current CRAN status: OK: 13