CRAN Package Check Results for Maintainer ‘Ruoyong Xu <ruoyong.xu at mail.utoronto.ca>’

Last updated on 2024-06-18 07:58:01 CEST.

Package ERROR WARN NOTE OK
clrng 4
gpuR 3 1 4

Package clrng

Current CRAN status: ERROR: 4

Additional issues

M1mac

Version: 0.0.3
Check: installed package size
Result: NOTE installed size is 11.9Mb sub-directories of 1Mb or more: libs 11.6Mb Flavors: r-release-macos-arm64, r-release-macos-x86_64, r-oldrel-macos-arm64, r-oldrel-macos-x86_64

Version: 0.0.3
Check: examples
Result: ERROR Running examples in ‘clrng-Ex.R’ failed The error most likely occurred in: > ### Name: createStreamsGpu > ### Title: createStreamsGpu > ### Aliases: createStreamsGpu > > ### ** Examples > > library(clrng) > if (detectGPUs() >= 1) { + setBaseCreator(rep(12345,6)) + setContext(grep("gpu", listContexts()$device_type)[1]) + myStreamsGpu = createStreamsGpu(4) + t(as.matrix(myStreamsGpu)) + + myStreamsGpu2 = createStreamsGpu(6) + t(as.matrix(myStreamsGpu2)) }else { + message("No GPU context available") + } Error: ViennaCL: FATAL ERROR: CL_INVALID_MEM_OBJECT. If you think that this is a bug in ViennaCL, please report it at viennacl-support@lists.sourceforge.net and supply at least the following information: * Operating System * Which OpenCL implementation (AMD, NVIDIA, etc.) * ViennaCL version Many thanks in advance! Execution halted Flavors: r-release-macos-arm64, r-release-macos-x86_64, r-oldrel-macos-arm64, r-oldrel-macos-x86_64

Version: 0.0.3
Check: re-building of vignette outputs
Result: ERROR Error(s) in re-building vignettes: --- re-building ‘createStreams.Rmd’ using knitr Quitting from lines 17-52 [streams] (createStreams.Rmd) Error: processing vignette 'createStreams.Rmd' failed with diagnostics: ViennaCL: FATAL ERROR: CL_INVALID_MEM_OBJECT. If you think that this is a bug in ViennaCL, please report it at viennacl-support@lists.sourceforge.net and supply at least the following information: * Operating System * Which OpenCL implementation (AMD, NVIDIA, etc.) * ViennaCL version Many thanks in advance! --- failed re-building ‘createStreams.Rmd’ --- re-building ‘fisher.sim.Rmd’ using knitr UNSUPPORTED (log once): createKernel: newComputePipelineState failed Quitting from lines 29-59 [teaTasting on GPU] (fisher.sim.Rmd) Error: processing vignette 'fisher.sim.Rmd' failed with diagnostics: ViennaCL: FATAL ERROR: CL_INVALID_PROGRAM. If you think that this is a bug in ViennaCL, please report it at viennacl-support@lists.sourceforge.net and supply at least the following information: * Operating System * Which OpenCL implementation (AMD, NVIDIA, etc.) * ViennaCL version Many thanks in advance! --- failed re-building ‘fisher.sim.Rmd’ --- re-building ‘random_numbers.Rmd’ using knitr Quitting from lines 20-56 [unif] (random_numbers.Rmd) Error: processing vignette 'random_numbers.Rmd' failed with diagnostics: ViennaCL: FATAL ERROR: CL_INVALID_MEM_OBJECT. If you think that this is a bug in ViennaCL, please report it at viennacl-support@lists.sourceforge.net and supply at least the following information: * Operating System * Which OpenCL implementation (AMD, NVIDIA, etc.) * ViennaCL version Many thanks in advance! --- failed re-building ‘random_numbers.Rmd’ SUMMARY: processing the following files failed: ‘createStreams.Rmd’ ‘fisher.sim.Rmd’ ‘random_numbers.Rmd’ Error: Vignette re-building failed. Execution halted Flavor: r-release-macos-arm64

Version: 0.0.3
Check: whether the namespace can be loaded with stated dependencies
Result: WARN Error: .onLoad failed in loadNamespace() for 'clrng', details: call: gpuInfo(device_idx = as.integer(gpu_idx), context_idx = context_idx) error: No GPUs found in context Execution halted A namespace must be able to be loaded with just the base namespace loaded: otherwise if the namespace gets loaded by a saved object, the session will be unable to start. Probably some imports need to be declared in the NAMESPACE file. Flavors: r-release-macos-x86_64, r-oldrel-macos-x86_64

Version: 0.0.3
Check: whether the namespace can be unloaded cleanly
Result: WARN Error: .onLoad failed in loadNamespace() for 'clrng', details: call: gpuInfo(device_idx = as.integer(gpu_idx), context_idx = context_idx) error: No GPUs found in context Execution halted Flavors: r-release-macos-x86_64, r-oldrel-macos-x86_64

Version: 0.0.3
Check: dependencies in R code
Result: NOTE Error: .onLoad failed in loadNamespace() for 'clrng', details: call: gpuInfo(device_idx = as.integer(gpu_idx), context_idx = context_idx) error: No GPUs found in context Call sequence: 3: stop(gettextf("%s failed in %s() for '%s', details:\n call: %s\n error: %s", hookname, "loadNamespace", pkgname, deparse(conditionCall(res))[1L], conditionMessage(res)), call. = FALSE, domain = NA) 2: runHook(".onLoad", env, package.lib, package) 1: loadNamespace(package, lib.loc) Execution halted Flavors: r-release-macos-x86_64, r-oldrel-macos-x86_64

Version: 0.0.3
Check: S3 generic/method consistency
Result: WARN Error: .onLoad failed in loadNamespace() for 'clrng', details: call: gpuInfo(device_idx = as.integer(gpu_idx), context_idx = context_idx) error: No GPUs found in context Call sequence: 3: stop(gettextf("%s failed in %s() for '%s', details:\n call: %s\n error: %s", hookname, "loadNamespace", pkgname, deparse(conditionCall(res))[1L], conditionMessage(res)), call. = FALSE, domain = NA) 2: runHook(".onLoad", env, package.lib, package) 1: loadNamespace(package, lib.loc) Execution halted See section ‘Generic functions and methods’ in the ‘Writing R Extensions’ manual. Flavors: r-release-macos-x86_64, r-oldrel-macos-x86_64

Version: 0.0.3
Check: replacement functions
Result: WARN Error: .onLoad failed in loadNamespace() for 'clrng', details: call: gpuInfo(device_idx = as.integer(gpu_idx), context_idx = context_idx) error: No GPUs found in context Call sequence: 3: stop(gettextf("%s failed in %s() for '%s', details:\n call: %s\n error: %s", hookname, "loadNamespace", pkgname, deparse(conditionCall(res))[1L], conditionMessage(res)), call. = FALSE, domain = NA) 2: runHook(".onLoad", env, package.lib, package) 1: loadNamespace(package, lib.loc) Execution halted The argument of a replacement function which corresponds to the right hand side must be named ‘value’. Flavors: r-release-macos-x86_64, r-oldrel-macos-x86_64

Version: 0.0.3
Check: foreign function calls
Result: NOTE Error: .onLoad failed in loadNamespace() for 'clrng', details: call: gpuInfo(device_idx = as.integer(gpu_idx), context_idx = context_idx) error: No GPUs found in context Call sequence: 3: stop(gettextf("%s failed in %s() for '%s', details:\n call: %s\n error: %s", hookname, "loadNamespace", pkgname, deparse(conditionCall(res))[1L], conditionMessage(res)), call. = FALSE, domain = NA) 2: runHook(".onLoad", env, package.lib, package) 1: loadNamespace(package, lib.loc) Execution halted See chapter ‘System and foreign language interfaces’ in the ‘Writing R Extensions’ manual. Flavors: r-release-macos-x86_64, r-oldrel-macos-x86_64

Version: 0.0.3
Check: R code for possible problems
Result: NOTE Error: .onLoad failed in loadNamespace() for 'clrng', details: call: gpuInfo(device_idx = as.integer(gpu_idx), context_idx = context_idx) error: No GPUs found in context Execution halted Flavors: r-release-macos-x86_64, r-oldrel-macos-x86_64

Version: 0.0.3
Check: Rd \usage sections
Result: NOTE Error: .onLoad failed in loadNamespace() for 'clrng', details: call: gpuInfo(device_idx = as.integer(gpu_idx), context_idx = context_idx) error: No GPUs found in context Call sequence: 3: stop(gettextf("%s failed in %s() for '%s', details:\n call: %s\n error: %s", hookname, "loadNamespace", pkgname, deparse(conditionCall(res))[1L], conditionMessage(res)), call. = FALSE, domain = NA) 2: runHook(".onLoad", env, package.lib, package) 1: loadNamespace(package, lib.loc) Execution halted The \usage entries for S3 methods should use the \method markup and not their full name. See chapter ‘Writing R documentation files’ in the ‘Writing R Extensions’ manual. Flavors: r-release-macos-x86_64, r-oldrel-macos-x86_64

Version: 0.0.3
Check: re-building of vignette outputs
Result: ERROR Error(s) in re-building vignettes: --- re-building ‘createStreams.Rmd’ using knitr Quitting from lines 17-52 [streams] (createStreams.Rmd) Error: processing vignette 'createStreams.Rmd' failed with diagnostics: ViennaCL: FATAL ERROR: CL_INVALID_MEM_OBJECT. If you think that this is a bug in ViennaCL, please report it at viennacl-support@lists.sourceforge.net and supply at least the following information: * Operating System * Which OpenCL implementation (AMD, NVIDIA, etc.) * ViennaCL version Many thanks in advance! --- failed re-building ‘createStreams.Rmd’ --- re-building ‘fisher.sim.Rmd’ using knitr Quitting from lines 29-59 [teaTasting on GPU] (fisher.sim.Rmd) Error: processing vignette 'fisher.sim.Rmd' failed with diagnostics: The device 1 on context 2 does not support double. Try setting type = 'float' or change device if multiple available. --- failed re-building ‘fisher.sim.Rmd’ --- re-building ‘random_numbers.Rmd’ using knitr Quitting from lines 20-56 [unif] (random_numbers.Rmd) Error: processing vignette 'random_numbers.Rmd' failed with diagnostics: ViennaCL: FATAL ERROR: CL_INVALID_MEM_OBJECT. If you think that this is a bug in ViennaCL, please report it at viennacl-support@lists.sourceforge.net and supply at least the following information: * Operating System * Which OpenCL implementation (AMD, NVIDIA, etc.) * ViennaCL version Many thanks in advance! --- failed re-building ‘random_numbers.Rmd’ SUMMARY: processing the following files failed: ‘createStreams.Rmd’ ‘fisher.sim.Rmd’ ‘random_numbers.Rmd’ Error: Vignette re-building failed. Execution halted Flavor: r-release-macos-x86_64

Version: 0.0.3
Check: running R code from vignettes
Result: ERROR Errors in running code in vignettes: when running code in ‘createStreams.Rmd’ ... + streamsonCpu <- createStreamsCpu(n = 4) .... [TRUNCATED] When sourcing ‘createStreams.R’: Error: ViennaCL: FATAL ERROR: CL_INVALID_MEM_OBJECT. If you think that this is a bug in ViennaCL, please report it at viennacl-support@lists.sourceforge.net and supply at least the following information: * Operating System * Which OpenCL implementation (AMD, NVIDIA, etc.) * ViennaCL version Many thanks in advance! Execution halted when running code in ‘fisher.sim.Rmd’ ... UNSUPPORTED (log once): createKernel: newComputePipelineState failed When sourcing ‘fisher.sim.R’: Error: ViennaCL: FATAL ERROR: CL_INVALID_PROGRAM. If you think that this is a bug in ViennaCL, please report it at viennacl-support@lists.sourceforge.net and supply at least the following information: * Operating System * Which OpenCL implementation (AMD, NVIDIA, etc.) * ViennaCL version Many thanks in advance! Execution halted when running code in ‘random_numbers.Rmd’ ... + setContext(grep("gpu ..." ... [TRUNCATED] When sourcing ‘random_numbers.R’: Error: ViennaCL: FATAL ERROR: CL_INVALID_MEM_OBJECT. If you think that this is a bug in ViennaCL, please report it at viennacl-support@lists.sourceforge.net and supply at least the following information: * Operating System * Which OpenCL implementation (AMD, NVIDIA, etc.) * ViennaCL version Many thanks in advance! Execution halted ‘createStreams.Rmd’ using ‘UTF-8’... failed ‘fisher.sim.Rmd’ using ‘UTF-8’... failed ‘random_numbers.Rmd’ using ‘UTF-8’... failed Flavor: r-oldrel-macos-arm64

Version: 0.0.3
Check: re-building of vignette outputs
Result: NOTE Error(s) in re-building vignettes: --- re-building ‘createStreams.Rmd’ using knitr Quitting from lines 17-52 [streams] (createStreams.Rmd) Error: processing vignette 'createStreams.Rmd' failed with diagnostics: ViennaCL: FATAL ERROR: CL_INVALID_MEM_OBJECT. If you think that this is a bug in ViennaCL, please report it at viennacl-support@lists.sourceforge.net and supply at least the following information: * Operating System * Which OpenCL implementation (AMD, NVIDIA, etc.) * ViennaCL version Many thanks in advance! --- failed re-building ‘createStreams.Rmd’ --- re-building ‘fisher.sim.Rmd’ using knitr UNSUPPORTED (log once): createKernel: newComputePipelineState failed Quitting from lines 29-59 [teaTasting on GPU] (fisher.sim.Rmd) Error: processing vignette 'fisher.sim.Rmd' failed with diagnostics: ViennaCL: FATAL ERROR: CL_INVALID_PROGRAM. If you think that this is a bug in ViennaCL, please report it at viennacl-support@lists.sourceforge.net and supply at least the following information: * Operating System * Which OpenCL implementation (AMD, NVIDIA, etc.) * ViennaCL version Many thanks in advance! --- failed re-building ‘fisher.sim.Rmd’ --- re-building ‘random_numbers.Rmd’ using knitr Quitting from lines 20-56 [unif] (random_numbers.Rmd) Error: processing vignette 'random_numbers.Rmd' failed with diagnostics: ViennaCL: FATAL ERROR: CL_INVALID_MEM_OBJECT. If you think that this is a bug in ViennaCL, please report it at viennacl-support@lists.sourceforge.net and supply at least the following information: * Operating System * Which OpenCL implementation (AMD, NVIDIA, etc.) * ViennaCL version Many thanks in advance! --- failed re-building ‘random_numbers.Rmd’ SUMMARY: processing the following files failed: ‘createStreams.Rmd’ ‘fisher.sim.Rmd’ ‘random_numbers.Rmd’ Error: Vignette re-building failed. Execution halted Flavor: r-oldrel-macos-arm64

Version: 0.0.3
Check: running R code from vignettes
Result: ERROR Errors in running code in vignettes: when running code in ‘createStreams.Rmd’ ... + streamsonCpu <- createStreamsCpu(n = 4) .... [TRUNCATED] When sourcing ‘createStreams.R’: Error: ViennaCL: FATAL ERROR: CL_INVALID_MEM_OBJECT. If you think that this is a bug in ViennaCL, please report it at viennacl-support@lists.sourceforge.net and supply at least the following information: * Operating System * Which OpenCL implementation (AMD, NVIDIA, etc.) * ViennaCL version Many thanks in advance! Execution halted when running code in ‘fisher.sim.Rmd’ ... > if (detectGPUs()) { + setContext(grep("gpu", listContexts()$device_type)[1]) + gpuInfo()$deviceName + getOption("clrng.Nglobal") + g .... [TRUNCATED] When sourcing ‘fisher.sim.R’: Error: The device 1 on context 2 does not support double. Try setting type = 'float' or change device if multiple available. Execution halted when running code in ‘random_numbers.Rmd’ ... + setContext(grep("gpu ..." ... [TRUNCATED] When sourcing ‘random_numbers.R’: Error: ViennaCL: FATAL ERROR: CL_INVALID_MEM_OBJECT. If you think that this is a bug in ViennaCL, please report it at viennacl-support@lists.sourceforge.net and supply at least the following information: * Operating System * Which OpenCL implementation (AMD, NVIDIA, etc.) * ViennaCL version Many thanks in advance! Execution halted ‘createStreams.Rmd’ using ‘UTF-8’... failed ‘fisher.sim.Rmd’ using ‘UTF-8’... failed ‘random_numbers.Rmd’ using ‘UTF-8’... failed Flavor: r-oldrel-macos-x86_64

Version: 0.0.3
Check: re-building of vignette outputs
Result: NOTE Error(s) in re-building vignettes: --- re-building ‘createStreams.Rmd’ using knitr Quitting from lines 17-52 [streams] (createStreams.Rmd) Error: processing vignette 'createStreams.Rmd' failed with diagnostics: ViennaCL: FATAL ERROR: CL_INVALID_MEM_OBJECT. If you think that this is a bug in ViennaCL, please report it at viennacl-support@lists.sourceforge.net and supply at least the following information: * Operating System * Which OpenCL implementation (AMD, NVIDIA, etc.) * ViennaCL version Many thanks in advance! --- failed re-building ‘createStreams.Rmd’ --- re-building ‘fisher.sim.Rmd’ using knitr Quitting from lines 29-59 [teaTasting on GPU] (fisher.sim.Rmd) Error: processing vignette 'fisher.sim.Rmd' failed with diagnostics: The device 1 on context 2 does not support double. Try setting type = 'float' or change device if multiple available. --- failed re-building ‘fisher.sim.Rmd’ --- re-building ‘random_numbers.Rmd’ using knitr Quitting from lines 20-56 [unif] (random_numbers.Rmd) Error: processing vignette 'random_numbers.Rmd' failed with diagnostics: ViennaCL: FATAL ERROR: CL_INVALID_MEM_OBJECT. If you think that this is a bug in ViennaCL, please report it at viennacl-support@lists.sourceforge.net and supply at least the following information: * Operating System * Which OpenCL implementation (AMD, NVIDIA, etc.) * ViennaCL version Many thanks in advance! --- failed re-building ‘random_numbers.Rmd’ SUMMARY: processing the following files failed: ‘createStreams.Rmd’ ‘fisher.sim.Rmd’ ‘random_numbers.Rmd’ Error: Vignette re-building failed. Execution halted Flavor: r-oldrel-macos-x86_64

Package gpuR

Current CRAN status: WARN: 3, NOTE: 1, OK: 4

Version: 2.0.6
Check: installed package size
Result: NOTE installed size is 56.3Mb sub-directories of 1Mb or more: libs 53.8Mb Flavors: r-release-macos-arm64, r-release-macos-x86_64, r-oldrel-macos-arm64, r-oldrel-macos-x86_64

Version: 2.0.6
Check: re-building of vignette outputs
Result: WARN Error(s) in re-building vignettes: --- re-building ‘custom_ocl_gpuR.Rnw’ using knitr Error: processing vignette 'custom_ocl_gpuR.Rnw' failed with diagnostics: Running 'texi2dvi' on 'custom_ocl_gpuR.tex' failed. LaTeX errors: ! Undefined control sequence. l.108 \hlsng {"__kernel void SAXPY(__global float* x, __global float* y, floa... ? ! Emergency stop. l.108 End of file on the terminal! ! ==> Fatal error occurred, no output PDF file produced! --- failed re-building ‘custom_ocl_gpuR.Rnw’ --- re-building ‘gpuR.Rnw’ using knitr Error: processing vignette 'gpuR.Rnw' failed with diagnostics: Running 'texi2dvi' on 'gpuR.tex' failed. LaTeX errors: ! Undefined control sequence. l.147 \hlkwd{install.packages}\hldef {(}\hlsng{"gpuR"}\hldef{)} ? ! Emergency stop. ! Emergency stop. l.147 End of file on the terminal! ! ==> Fatal error occurred, no output PDF file produced! --- failed re-building ‘gpuR.Rnw’ SUMMARY: processing the following files failed: ‘custom_ocl_gpuR.Rnw’ ‘gpuR.Rnw’ Error: Vignette re-building failed. Execution halted Flavor: r-release-macos-x86_64

Version: 2.0.6
Check: re-building of vignette outputs
Result: WARN Error(s) in re-building vignettes: --- re-building ‘custom_ocl_gpuR.Rnw’ using knitr Error: processing vignette 'custom_ocl_gpuR.Rnw' failed with diagnostics: Running 'texi2dvi' on 'custom_ocl_gpuR.tex' failed. LaTeX errors: ! Missing $ inserted. <inserted text> $ l.116 custom_ ocl_gpuR.R\end{kframe} ! Emergency stop. <inserted text> $ l.116 custom_ ocl_gpuR.R\end{kframe} ! ==> Fatal error occurred, no output PDF file produced! --- failed re-building ‘custom_ocl_gpuR.Rnw’ --- re-building ‘gpuR.Rnw’ using knitr --- finished re-building ‘gpuR.Rnw’ SUMMARY: processing the following file failed: ‘custom_ocl_gpuR.Rnw’ Error: Vignette re-building failed. Execution halted Flavors: r-oldrel-macos-arm64, r-oldrel-macos-x86_64